Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               1-490
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               318
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               78, 104
               

               Conread position:
               1-498
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               5-658
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               6-299
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               6-379
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               34, 61
               

               Conread position:
               6-598
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 234
               

               Conread position:
               8-708
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 108
               

               Conread position:
               9-387
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 104
               

               Conread position:
               13-487
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 19
               

               Conread position:
               13-488
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 20
               

               Conread position:
               16-283
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               16-661
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 83
               

               Conread position:
               22-224
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               28-387
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               39, 5
               

               Conread position:
               29-407
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 79
               

               Conread position:
               32-490
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 86
               

               Conread position:
               33-387
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 199
               

               Conread position:
               37-408
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 196
               

               Conread position:
               38-408
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               11, 188
               

               Conread position:
               53-326
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 111
               

               Conread position:
               53-624
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               57-407
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               57-408
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               272, 171
               

               Conread position:
               57-493
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 141
               

               Conread position:
               57-545
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 44
               

               Conread position:
               59-199
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               64-327
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               177, 88
               

               Conread position:
               70-219
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               73-371
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               73-386
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               270, 76
               

               Conread position:
               73-386
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               270, 109
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               270, 81
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               269, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               45, 158
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               238, 111
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               270, 114
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               262, 83
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               106, 158
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               73-409
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               270, 153
               

               Conread position:
               73-425
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               267, 157
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               263, 153
               

               Conread position:
               77-431
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               266, 153
               

               Conread position:
               94-387
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               106-660
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 81
               

               Conread position:
               112-527
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 19
               

               Conread position:
               122-494
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               183, 70
               

               Conread position:
               143-540
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 49
               

               Conread position:
               154-485
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               161, 66
               

               Conread position:
               169-419
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               187-624
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 7
               

               Conread position:
               191-599
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               247-422
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 173
               

               Conread position:
               247-618
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 140
               

               Conread position:
               248-490
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               249-661
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               10, 245
               

               Conread position:
               251-404
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               151, 57
               

               Conread position:
               281-659
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 126
               

               Conread position:
               285-635
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 50
               

               Conread position:
               343-496
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 61
               
Show alignments to all cow chromosomes.