Cow genome map


           Conread name:
           Ss1.1-rcbl0_018774.5
        

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 5
               

               Conread position:
               6-529
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               7-379
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               8-388
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               8-413
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               290
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               36, 189
               

               Conread position:
               8-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 179
               

               Conread position:
               8-582
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 85
               

               Conread position:
               8-661
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               9-599
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 225
               

               Conread position:
               12-462
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               305
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               21-233
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               169, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               22-225
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-226
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               22-233
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               23-225
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               26-225
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               27-359
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               28-708
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 6
               

               Conread position:
               32-387
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               41, 191
               

               Conread position:
               38-498
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 188
               

               Conread position:
               47-655
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 125
               

               Conread position:
               51-408
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               137, 22
               

               Conread position:
               54-483
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               57-402
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               202, 171
               

               Conread position:
               57-623
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               57-633
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 46
               

               Conread position:
               57-670
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 98
               

               Conread position:
               57-708
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 120
               

               Conread position:
               60-700
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               64-226
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-349
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               178, 30
               

               Conread position:
               64-406
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               126, 165
               

               Conread position:
               70-484
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               137, 120
               

               Conread position:
               73-371
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-372
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               224, 148
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               263, 120
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               73-387
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-388
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               81, 121
               

               Conread position:
               73-399
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               128, 81
               

               Conread position:
               73-400
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               179, 47
               

               Conread position:
               73-405
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               270, 157
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               270, 76
               

               Conread position:
               73-408
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               270, 140
               

               Conread position:
               75-345
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               157, 25
               

               Conread position:
               75-413
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               77-387
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               148, 170
               

               Conread position:
               77-408
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               150, 116
               

               Conread position:
               78-399
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               123, 28
               

               Conread position:
               79-499
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               88, 121
               

               Conread position:
               87-387
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               256, 143
               

               Conread position:
               116-285
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               144-708
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 70
               

               Conread position:
               193-425
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               234-434
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 183
               

               Conread position:
               240-408
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 16
               

               Conread position:
               243-404
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               256-432
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               337-627
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 110
               
Show alignments to all cow chromosomes.