Cow genome map

Conread name: Ss1.1-rcbl0_018973.5

Conread position: 214-696
Cow position:
Alignm length: 524
Alignm identity: 344
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 7

Conread position: 236-653
Cow position:
Alignm length: 425
Alignm identity: 286
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 43, 122

Conread position: 262-565
Cow position:
Alignm length: 311
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 110

Conread position: 288-541
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 105

Conread position: 307-697
Cow position:
Alignm length: 399
Alignm identity: 259
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 80

Conread position: 328-707
Cow position:
Alignm length: 387
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 342-556
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 16

Conread position: 359-728
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 70

Conread position: 374-516
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 381-732
Cow position:
Alignm length: 356
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 388-684
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 7, 32

Conread position: 391-732
Cow position:
Alignm length: 347
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 46

Conread position: 392-698
Cow position:
Alignm length: 312
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-730
Cow position:
Alignm length: 344
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 31

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 347
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 396-538
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 398-544
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 17

Conread position: 401-529
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 14

Conread position: 401-544
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 401-703
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 401-732
Cow position:
Alignm length: 337
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 8

Conread position: 401-732
Cow position:
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 14

Conread position: 409-687
Cow position:
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 409-732
Cow position:
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 410-732
Cow position:
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 29

Conread position: 411-732
Cow position:
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 411-732
Cow position:
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 65

Conread position: 422-541
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 422-701
Cow position:
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 422-732
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 86

Conread position: 429-698
Cow position:
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 114

Conread position: 463-696
Cow position:
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 123

Conread position: 464-732
Cow position:
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 244

Conread position: 469-731
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 115

Conread position: 482-718
Cow position:
Alignm length: 240
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 122

Conread position: 509-619
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 83

Conread position: 509-731
Cow position:
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 509-731
Cow position:
Alignm length: 228
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 509-732
Cow position:
Alignm length: 228
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 509-732
Cow position:
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 515-696
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 10

Conread position: 567-732
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 155

Conread position: 568-732
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 577-732
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 145

Conread position: 585-732
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 603-732
Cow position:
Alignm length: 130
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.