Cow genome map

Conread name: Ss1.1-rcbl0_018973.5

Conread position: 1-245
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 77

Conread position: 1-464
Cow position:
Alignm length: 470
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 61

Conread position: 1-467
Cow position:
Alignm length: 474
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 41

Conread position: 1-596
Cow position:
Alignm length: 607
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 56

Conread position: 114-697
Cow position:
Alignm length: 597
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 123-697
Cow position:
Alignm length: 591
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 6

Conread position: 136-725
Cow position:
Alignm length: 602
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 258

Conread position: 154-537
Cow position:
Alignm length: 390
Alignm identity: 257
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 38, 6

Conread position: 168-732
Cow position:
Alignm length: 576
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 21

Conread position: 171-637
Cow position:
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 92

Conread position: 173-703
Cow position:
Alignm length: 543
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 88

Conread position: 199-466
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 19

Conread position: 221-732
Cow position:
Alignm length: 513
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 38

Conread position: 231-676
Cow position:
Alignm length: 456
Alignm identity: 292
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 173

Conread position: 233-561
Cow position:
Alignm length: 338
Alignm identity: 234
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 13, 170

Conread position: 233-705
Cow position:
Alignm length: 489
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 20

Conread position: 233-725
Cow position:
Alignm length: 497
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 25

Conread position: 243-663
Cow position:
Alignm length: 428
Alignm identity: 289
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 76, 19

Conread position: 260-732
Cow position:
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 12

Conread position: 262-623
Cow position:
Alignm length: 365
Alignm identity: 243
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 8, 124

Conread position: 262-726
Cow position:
Alignm length: 472
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 263-732
Cow position:
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 44

Conread position: 274-478
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 278-728
Cow position:
Alignm length: 451
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 281-632
Cow position:
Alignm length: 358
Alignm identity: 246
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 259, 7

Conread position: 282-693
Cow position:
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 285-701
Cow position:
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 285-732
Cow position:
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 8

Conread position: 288-634
Cow position:
Alignm length: 353
Alignm identity: 241
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 33

Conread position: 291-537
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 53

Conread position: 300-732
Cow position:
Alignm length: 440
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 301-652
Cow position:
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 167

Conread position: 301-696
Cow position:
Alignm length: 409
Alignm identity: 264
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 102

Conread position: 301-697
Cow position:
Alignm length: 401
Alignm identity: 267
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 55, 66

Conread position: 301-723
Cow position:
Alignm length: 439
Alignm identity: 278
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 53

Conread position: 301-731
Cow position:
Alignm length: 444
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 133

Conread position: 302-695
Cow position:
Alignm length: 406
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 13

Conread position: 306-701
Cow position:
Alignm length: 404
Alignm identity: 271
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 29, 140

Conread position: 307-499
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 78

Conread position: 307-731
Cow position:
Alignm length: 435
Alignm identity: 275
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 35

Conread position: 307-731
Cow position:
Alignm length: 434
Alignm identity: 275
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 103, 41

Conread position: 317-708
Cow position:
Alignm length: 399
Alignm identity: 257
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 24

Conread position: 330-691
Cow position:
Alignm length: 370
Alignm identity: 229
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 101

Conread position: 337-732
Cow position:
Alignm length: 400
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 143

Conread position: 338-731
Cow position:
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 48

Conread position: 356-713
Cow position:
Alignm length: 372
Alignm identity: 252
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 59, 44

Conread position: 359-728
Cow position:
Alignm length: 386
Alignm identity: 246
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 136

Conread position: 363-612
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 20

Conread position: 365-725
Cow position:
Alignm length: 378
Alignm identity: 252
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 13

Conread position: 370-732
Cow position:
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 31

Conread position: 378-531
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 75

Conread position: 378-697
Cow position:
Alignm length: 327
Alignm identity: 214
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 66

Conread position: 383-694
Cow position:
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 17

Conread position: 386-732
Cow position:
Alignm length: 351
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 139

Conread position: 391-530
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 7

Conread position: 391-530
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 25

Conread position: 391-685
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 391-722
Cow position:
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 392-701
Cow position:
Alignm length: 315
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 392-730
Cow position:
Alignm length: 342
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 392-731
Cow position:
Alignm length: 343
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 24

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 24

Conread position: 392-732
Cow position:
Alignm length: 350
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 345
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 345
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 392-732
Cow position:
Alignm length: 351
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 235

Conread position: 392-732
Cow position:
Alignm length: 344
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 393-567
Cow position:
Alignm length: 177
Alignm identity: 145
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 146, 22

Conread position: 393-732
Cow position:
Alignm length: 344
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 46

Conread position: 393-732
Cow position:
Alignm length: 345
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 46

Conread position: 393-732
Cow position:
Alignm length: 344
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 23

Conread position: 396-732
Cow position:
Alignm length: 344
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 122

Conread position: 397-703
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 397-732
Cow position:
Alignm length: 341
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 399-732
Cow position:
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 23

Conread position: 401-513
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 401-529
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 401-530
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 14

Conread position: 401-530
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 14

Conread position: 401-534
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 14

Conread position: 401-536
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 14

Conread position: 401-556
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 15

Conread position: 401-593
Cow position:
Alignm length: 195
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 14

Conread position: 401-671
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 15

Conread position: 401-697
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 14

Conread position: 401-725
Cow position:
Alignm length: 331
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 8

Conread position: 401-731
Cow position:
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 14

Conread position: 401-732
Cow position:
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 14

Conread position: 401-732
Cow position:
Alignm length: 336
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 15

Conread position: 401-732
Cow position:
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 8

Conread position: 401-732
Cow position:
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 8

Conread position: 401-732
Cow position:
Alignm length: 336
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 14

Conread position: 401-732
Cow position:
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 8

Conread position: 401-732
Cow position:
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 14

Conread position: 402-633
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 13

Conread position: 402-732
Cow position:
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 402-732
Cow position:
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 14

Conread position: 404-732
Cow position:
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 11

Conread position: 406-732
Cow position:
Alignm length: 331
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 26

Conread position: 409-656
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 409-662
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 409-732
Cow position:
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 411-731
Cow position:
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 171

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 27

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 11

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 109

Conread position: 412-732
Cow position:
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 422-732
Cow position:
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 422-732
Cow position:
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 287

Conread position: 422-732
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 28

Conread position: 422-732
Cow position:
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 270

Conread position: 422-732
Cow position:
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 423-719
Cow position:
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 159

Conread position: 423-723
Cow position:
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 260

Conread position: 427-684
Cow position:
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 163

Conread position: 429-732
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 429-732
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 132

Conread position: 434-673
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 107, 17

Conread position: 453-731
Cow position:
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 265

Conread position: 453-732
Cow position:
Alignm length: 282
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 55

Conread position: 456-732
Cow position:
Alignm length: 283
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 464-732
Cow position:
Alignm length: 273
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 222

Conread position: 464-732
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 39

Conread position: 467-732
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 104

Conread position: 468-696
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 25

Conread position: 469-731
Cow position:
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 130

Conread position: 475-732
Cow position:
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 489-719
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 55, 147

Conread position: 507-728
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 170

Conread position: 512-723
Cow position:
Alignm length: 216
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 512-732
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 522-732
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 529-732
Cow position:
Alignm length: 208
Alignm identity: 166
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 15, 46

Conread position: 553-696
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 558-731
Cow position:
Alignm length: 176
Alignm identity: 139
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 144

Conread position: 560-724
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 8

Conread position: 572-732
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 593-732
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 615-732
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.