Cow genome map
| Conread name: | Ss1.1-rcbl0_018973.5 |
| Conread position: | 1-245 |
| Cow position: | chr15:32679722-32679490 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 70, 77 |
| Conread position: | 1-464 |
| Cow position: | chr15:35648382-35647927 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 61 |
| Conread position: | 1-467 |
| Cow position: | chr15:369831-369371 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 41 |
| Conread position: | 1-596 |
| Cow position: | chr15:36642468-36643046 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 56 |
| Conread position: | 114-697 |
| Cow position: | chr15:7788070-7787492 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 123-697 |
| Cow position: | chr15:498397-498971 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 6 |
| Conread position: | 136-725 |
| Cow position: | chr15:24794014-24794591 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 258 |
| Conread position: | 154-537 |
| Cow position: | chr15:11298726-11298346 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 168-732 |
| Cow position: | chr15:19817656-19818211 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 21 |
| Conread position: | 171-637 |
| Cow position: | chr15:12615173-12615619 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 173-703 |
| Cow position: | chr15:686627-687150 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 88 |
| Conread position: | 199-466 |
| Cow position: | chr15:23264788-23265051 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 221-732 |
| Cow position: | chr15:16507742-16508237 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 38 |
| Conread position: | 231-676 |
| Cow position: | chr15:9739897-9739456 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 173 |
| Conread position: | 233-561 |
| Cow position: | chr15:24716624-24716942 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 13, 170 |
| Conread position: | 233-705 |
| Cow position: | chr15:3842674-3842200 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 20 |
| Conread position: | 233-725 |
| Cow position: | chr15:9429699-9430179 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 243-663 |
| Cow position: | chr15:17218631-17218223 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 289 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 260-732 |
| Cow position: | chr15:40105649-40106109 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 262-623 |
| Cow position: | chr15:1664269-1664616 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 8, 124 |
| Conread position: | 262-726 |
| Cow position: | chr15:6622871-6623332 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 263-732 |
| Cow position: | chr15:2413778-2413317 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 44 |
| Conread position: | 274-478 |
| Cow position: | chr15:14633867-14634065 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 278-728 |
| Cow position: | chr15:21449500-21449930 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 281-632 |
| Cow position: | chr15:20357097-20356748 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 259, 7 |
| Conread position: | 282-693 |
| Cow position: | chr15:7966170-7965749 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 285-701 |
| Cow position: | chr15:36626492-36626066 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 285-732 |
| Cow position: | chr15:1237489-1237927 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 288-634 |
| Cow position: | chr15:2011884-2012227 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 291-537 |
| Cow position: | chr15:1254685-1254928 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 300-732 |
| Cow position: | chr15:51714776-51715208 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 301-652 |
| Cow position: | chr15:7234111-7234468 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 167 |
| Conread position: | 301-696 |
| Cow position: | chr15:31784977-31784580 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 301-697 |
| Cow position: | chr15:30810825-30811206 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 301-723 |
| Cow position: | chr15:14372571-14372137 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 301-731 |
| Cow position: | chr15:7984205-7983777 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 133 |
| Conread position: | 302-695 |
| Cow position: | chr15:2802357-2801957 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 306-701 |
| Cow position: | chr15:11625423-11625819 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 307-499 |
| Cow position: | chr15:8408788-8408985 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 307-731 |
| Cow position: | chr15:33644983-33644554 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 307-731 |
| Cow position: | chr15:53577518-53577094 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 317-708 |
| Cow position: | chr15:47261292-47261681 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 330-691 |
| Cow position: | chr15:48322650-48323018 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 101 |
| Conread position: | 337-732 |
| Cow position: | chr15:35735428-35735821 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 338-731 |
| Cow position: | chr15:7549264-7549647 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 48 |
| Conread position: | 356-713 |
| Cow position: | chr15:32481018-32480653 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 359-728 |
| Cow position: | chr15:30928605-30928226 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 363-612 |
| Cow position: | chr15:7929340-7929581 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 365-725 |
| Cow position: | chr15:32693442-32693809 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 370-732 |
| Cow position: | chr15:32673659-32673306 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 31 |
| Conread position: | 378-531 |
| Cow position: | chr15:7054657-7054812 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 378-697 |
| Cow position: | chr15:13674417-13674737 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 383-694 |
| Cow position: | chr15:9912536-9912844 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 17 |
| Conread position: | 386-732 |
| Cow position: | chr15:4961546-4961891 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 139 |
| Conread position: | 391-530 |
| Cow position: | chr15:6369873-6369731 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 391-530 |
| Cow position: | chr15:38195394-38195534 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 391-685 |
| Cow position: | chr15:6593038-6592753 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 391-722 |
| Cow position: | chr15:690696-691009 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 392-701 |
| Cow position: | chr15:51216496-51216805 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 392-730 |
| Cow position: | chr15:4385175-4385512 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 392-731 |
| Cow position: | chr15:8099395-8099725 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 392-732 |
| Cow position: | chr15:4922058-4922401 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 392-732 |
| Cow position: | chr15:6156046-6155698 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 392-732 |
| Cow position: | chr15:7837151-7837494 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr15:15347212-15346869 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr15:18332921-18332582 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 392-732 |
| Cow position: | chr15:19738146-19737805 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr15:21665839-21665500 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr15:31358793-31359132 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr15:32494479-32494139 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 392-732 |
| Cow position: | chr15:35753691-35753342 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 235 |
| Conread position: | 392-732 |
| Cow position: | chr15:42936621-42936959 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr15:44069830-44070170 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 48 |
| Conread position: | 393-567 |
| Cow position: | chr15:4682140-4682314 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 146, 22 |
| Conread position: | 393-732 |
| Cow position: | chr15:2076556-2076895 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 393-732 |
| Cow position: | chr15:18576622-18576961 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 393-732 |
| Cow position: | chr15:37392400-37392740 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 396-732 |
| Cow position: | chr15:12421256-12420915 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 122 |
| Conread position: | 397-703 |
| Cow position: | chr15:328337-328651 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 397-732 |
| Cow position: | chr15:44828705-44829045 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 399-732 |
| Cow position: | chr15:1772407-1772743 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 401-513 |
| Cow position: | chr15:6553939-6553828 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 401-529 |
| Cow position: | chr15:38979845-38979975 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 401-530 |
| Cow position: | chr15:10787211-10787082 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-530 |
| Cow position: | chr15:17271479-17271352 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-534 |
| Cow position: | chr15:25186045-25185914 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 401-536 |
| Cow position: | chr15:36648825-36648961 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 401-556 |
| Cow position: | chr15:6650082-6649929 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 401-593 |
| Cow position: | chr15:23156925-23156733 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-671 |
| Cow position: | chr15:41366087-41366357 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 401-697 |
| Cow position: | chr15:7894314-7894021 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 14 |
| Conread position: | 401-725 |
| Cow position: | chr15:7260544-7260864 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 401-731 |
| Cow position: | chr15:4671346-4671682 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 401-732 |
| Cow position: | chr15:315942-315610 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 14 |
| Conread position: | 401-732 |
| Cow position: | chr15:524944-524612 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 15 |
| Conread position: | 401-732 |
| Cow position: | chr15:4765122-4765456 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 8 |
| Conread position: | 401-732 |
| Cow position: | chr15:7544799-7545128 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 8 |
| Conread position: | 401-732 |
| Cow position: | chr15:8750343-8750672 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 14 |
| Conread position: | 401-732 |
| Cow position: | chr15:10888522-10888863 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 8 |
| Conread position: | 401-732 |
| Cow position: | chr15:17292355-17292693 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 14 |
| Conread position: | 402-633 |
| Cow position: | chr15:53338942-53339168 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 140, 13 |
| Conread position: | 402-732 |
| Cow position: | chr15:4142909-4142573 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 402-732 |
| Cow position: | chr15:7934248-7934576 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 14 |
| Conread position: | 404-732 |
| Cow position: | chr15:1764010-1764342 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 11 |
| Conread position: | 406-732 |
| Cow position: | chr15:24295018-24295345 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 409-656 |
| Cow position: | chr15:29009757-29010008 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 409-662 |
| Cow position: | chr15:36077165-36077422 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 409-732 |
| Cow position: | chr15:1882588-1882261 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 411-731 |
| Cow position: | chr15:50146998-50147311 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 171 |
| Conread position: | 411-732 |
| Cow position: | chr15:444528-444850 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 27 |
| Conread position: | 411-732 |
| Cow position: | chr15:6471997-6471674 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 11 |
| Conread position: | 411-732 |
| Cow position: | chr15:18268067-18267742 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 411-732 |
| Cow position: | chr15:28490221-28489903 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 109 |
| Conread position: | 412-732 |
| Cow position: | chr15:4196383-4196707 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 422-732 |
| Cow position: | chr15:1519219-1518905 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 422-732 |
| Cow position: | chr15:2647725-2647412 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 287 |
| Conread position: | 422-732 |
| Cow position: | chr15:3888810-3889124 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 422-732 |
| Cow position: | chr15:17080271-17079958 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 270 |
| Conread position: | 422-732 |
| Cow position: | chr15:50124011-50123697 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 423-719 |
| Cow position: | chr15:1834530-1834235 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 159 |
| Conread position: | 423-723 |
| Cow position: | chr15:56418-56725 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 260 |
| Conread position: | 427-684 |
| Cow position: | chr15:42320485-42320225 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 163 |
| Conread position: | 429-732 |
| Cow position: | chr15:3009913-3009607 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 429-732 |
| Cow position: | chr15:36970862-36971162 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 132 |
| Conread position: | 434-673 |
| Cow position: | chr15:369211-368973 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 107, 17 |
| Conread position: | 453-731 |
| Cow position: | chr15:35647699-35647418 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 265 |
| Conread position: | 453-732 |
| Cow position: | chr15:6078725-6078998 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 151, 55 |
| Conread position: | 456-732 |
| Cow position: | chr15:5980327-5980609 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 464-732 |
| Cow position: | chr15:3261355-3261084 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 222 |
| Conread position: | 464-732 |
| Cow position: | chr15:14582372-14582110 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 39 |
| Conread position: | 467-732 |
| Cow position: | chr15:4651344-4651613 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 104 |
| Conread position: | 468-696 |
| Cow position: | chr15:14634401-14634640 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 469-731 |
| Cow position: | chr15:4812586-4812844 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 130 |
| Conread position: | 475-732 |
| Cow position: | chr15:32720753-32720490 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 489-719 |
| Cow position: | chr15:2591764-2591531 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 55, 147 |
| Conread position: | 507-728 |
| Cow position: | chr15:32711118-32711341 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 37, 170 |
| Conread position: | 512-723 |
| Cow position: | chr15:6553793-6553578 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 512-732 |
| Cow position: | chr15:789551-789327 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 522-732 |
| Cow position: | chr15:38980701-38980915 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 529-732 |
| Cow position: | chr15:53137178-53136975 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 553-696 |
| Cow position: | chr15:32672980-32673127 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 558-731 |
| Cow position: | chr15:4678375-4678549 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 46, 144 |
| Conread position: | 560-724 |
| Cow position: | chr15:32203735-32203895 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 572-732 |
| Cow position: | chr15:4685684-4685846 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 593-732 |
| Cow position: | chr15:1782329-1782468 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 615-732 |
| Cow position: | chr15:31862425-31862308 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.