Cow genome map

Conread name: Ss1.1-rcbl0_018973.5

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 107, 54

Conread position: 1-477
Cow position:
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 61

Conread position: 1-732
Cow position:
Alignm length: 738
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 60

Conread position: 127-408
Cow position:
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 160-429
Cow position:
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 37

Conread position: 265-450
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 10

Conread position: 265-697
Cow position:
Alignm length: 440
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 169

Conread position: 277-722
Cow position:
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 284-537
Cow position:
Alignm length: 258
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 65

Conread position: 285-654
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 47, 121

Conread position: 290-652
Cow position:
Alignm length: 368
Alignm identity: 234
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 250, 26

Conread position: 293-728
Cow position:
Alignm length: 440
Alignm identity: 279
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 14

Conread position: 300-728
Cow position:
Alignm length: 438
Alignm identity: 277
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 8, 116

Conread position: 301-535
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 70

Conread position: 316-732
Cow position:
Alignm length: 426
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 390-725
Cow position:
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 105

Conread position: 391-544
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 25

Conread position: 392-722
Cow position:
Alignm length: 337
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 49

Conread position: 392-731
Cow position:
Alignm length: 346
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 349
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 392-732
Cow position:
Alignm length: 348
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 40

Conread position: 392-732
Cow position:
Alignm length: 348
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 6

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 359
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 358
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 393-639
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 24

Conread position: 393-696
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 17

Conread position: 398-719
Cow position:
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 17

Conread position: 401-529
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 14

Conread position: 401-530
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 14

Conread position: 401-536
Cow position:
Alignm length: 137
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 14

Conread position: 401-536
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 14

Conread position: 401-540
Cow position:
Alignm length: 140
Alignm identity: 119
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 401-540
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 122, 15

Conread position: 401-732
Cow position:
Alignm length: 336
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 26

Conread position: 401-732
Cow position:
Alignm length: 346
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 37

Conread position: 401-732
Cow position:
Alignm length: 334
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 14

Conread position: 402-732
Cow position:
Alignm length: 337
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 36

Conread position: 403-713
Cow position:
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 12

Conread position: 404-544
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 406-687
Cow position:
Alignm length: 293
Alignm identity: 195
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 55

Conread position: 406-732
Cow position:
Alignm length: 331
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 30

Conread position: 409-731
Cow position:
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 148

Conread position: 409-732
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 422-732
Cow position:
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 47

Conread position: 422-732
Cow position:
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 423-530
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 423-531
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 429-729
Cow position:
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 79

Conread position: 429-732
Cow position:
Alignm length: 308
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 429-732
Cow position:
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 439-537
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 439-718
Cow position:
Alignm length: 291
Alignm identity: 197
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 101

Conread position: 440-732
Cow position:
Alignm length: 297
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 262

Conread position: 441-731
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 447-732
Cow position:
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 179

Conread position: 452-728
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 89, 192

Conread position: 464-568
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 34

Conread position: 482-728
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 20, 30

Conread position: 512-686
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 18

Conread position: 523-722
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 70

Conread position: 555-731
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.