Cow genome map

Conread name: Ss1.1-rcbl0_018973.5

Conread position: 1-465
Cow position:
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 45

Conread position: 1-732
Cow position:
Alignm length: 751
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 58

Conread position: 1-732
Cow position:
Alignm length: 747
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 68

Conread position: 129-723
Cow position:
Alignm length: 603
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 71

Conread position: 145-545
Cow position:
Alignm length: 416
Alignm identity: 275
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 18

Conread position: 154-731
Cow position:
Alignm length: 600
Alignm identity: 391
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 8

Conread position: 171-581
Cow position:
Alignm length: 426
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 26

Conread position: 171-697
Cow position:
Alignm length: 541
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 164

Conread position: 194-501
Cow position:
Alignm length: 317
Alignm identity: 203
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 107

Conread position: 199-574
Cow position:
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 134

Conread position: 199-703
Cow position:
Alignm length: 520
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 59

Conread position: 227-662
Cow position:
Alignm length: 456
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 228-718
Cow position:
Alignm length: 502
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 226

Conread position: 246-731
Cow position:
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 185

Conread position: 249-731
Cow position:
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 181

Conread position: 266-573
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 10

Conread position: 278-519
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 77

Conread position: 278-730
Cow position:
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 77

Conread position: 289-644
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 141

Conread position: 290-702
Cow position:
Alignm length: 415
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 100

Conread position: 290-732
Cow position:
Alignm length: 466
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 189

Conread position: 295-558
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 47

Conread position: 303-582
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 48

Conread position: 307-722
Cow position:
Alignm length: 428
Alignm identity: 268
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 77

Conread position: 330-710
Cow position:
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 33

Conread position: 354-718
Cow position:
Alignm length: 377
Alignm identity: 241
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 191

Conread position: 357-555
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 66

Conread position: 359-703
Cow position:
Alignm length: 349
Alignm identity: 218
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 20

Conread position: 378-607
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 17

Conread position: 378-697
Cow position:
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 185

Conread position: 386-596
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 392-730
Cow position:
Alignm length: 344
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 350
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 344
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 392-732
Cow position:
Alignm length: 355
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 46

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 393-719
Cow position:
Alignm length: 331
Alignm identity: 218
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 146, 56

Conread position: 393-732
Cow position:
Alignm length: 345
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 44

Conread position: 396-541
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 398-530
Cow position:
Alignm length: 134
Alignm identity: 110
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 17

Conread position: 399-731
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 19

Conread position: 401-730
Cow position:
Alignm length: 334
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 14

Conread position: 401-730
Cow position:
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 8

Conread position: 401-731
Cow position:
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 14

Conread position: 401-732
Cow position:
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 198

Conread position: 403-732
Cow position:
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 48

Conread position: 410-732
Cow position:
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 135

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 141

Conread position: 419-544
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 422-537
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 422-681
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 115, 0

Conread position: 422-732
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 196

Conread position: 422-732
Cow position:
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 422-732
Cow position:
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 302

Conread position: 422-732
Cow position:
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 422-732
Cow position:
Alignm length: 315
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 423-693
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 90

Conread position: 428-732
Cow position:
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 81

Conread position: 429-638
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 84, 188

Conread position: 429-732
Cow position:
Alignm length: 307
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 178

Conread position: 429-732
Cow position:
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 429-732
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 432-632
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 114, 22

Conread position: 438-632
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 103, 162

Conread position: 439-731
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 7, 123

Conread position: 447-732
Cow position:
Alignm length: 290
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 452-722
Cow position:
Alignm length: 275
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 453-731
Cow position:
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 138

Conread position: 460-730
Cow position:
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 469-719
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 57, 159

Conread position: 471-732
Cow position:
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 477-732
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 482-732
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 177

Conread position: 499-732
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 106, 54

Conread position: 515-732
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 43

Conread position: 540-732
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 184

Conread position: 545-732
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 51, 79

Conread position: 550-732
Cow position:
Alignm length: 185
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 567-732
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 627-732
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 627-732
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.