Cow genome map


           Conread name:
           Ss1.1-rcbl0_018973.5
        

               Conread position:
               1-161
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 68
               

               Conread position:
               170-719
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 115
               

               Conread position:
               227-721
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               87, 31
               

               Conread position:
               252-619
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 111
               

               Conread position:
               262-607
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               295-542
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               295-697
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               34, 74
               

               Conread position:
               303-728
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               275
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               303-732
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               319-704
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 67
               

               Conread position:
               328-580
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               373-731
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 7
               

               Conread position:
               386-722
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               392-731
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               393-699
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 23
               

               Conread position:
               393-724
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 46
               

               Conread position:
               394-544
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               401-515
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               401-530
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               401-695
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               401-728
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 15
               

               Conread position:
               401-732
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 14
               

               Conread position:
               401-732
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               401-732
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 37
               

               Conread position:
               402-732
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 13
               

               Conread position:
               404-730
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               409-732
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               409-732
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               410-574
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               411-732
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               411-732
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 188
               

               Conread position:
               422-732
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 171
               

               Conread position:
               429-732
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 87
               

               Conread position:
               441-731
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 46
               

               Conread position:
               447-732
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               463-569
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               78, 19
               

               Conread position:
               466-731
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 91
               

               Conread position:
               469-732
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 231
               

               Conread position:
               471-732
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               196, 68
               

               Conread position:
               477-731
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               491-732
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               499-732
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 25
               

               Conread position:
               512-732
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 200
               

               Conread position:
               555-731
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               586-732
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               587-732
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               17, 99
               
Show alignments to all cow chromosomes.