Cow genome map
| Conread name: | Ss1.1-rcbl0_018973.5 |
| Conread position: | 1-472 |
| Cow position: | chr26:9845316-9844875 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 235-496 |
| Cow position: | chr26:20255515-20255771 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 14, 104 |
| Conread position: | 236-435 |
| Cow position: | chr26:9848941-9848745 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 91 |
| Conread position: | 238-464 |
| Cow position: | chr26:12656609-12656841 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 40, 149 |
| Conread position: | 276-724 |
| Cow position: | chr26:4334104-4333653 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 373-721 |
| Cow position: | chr26:28083966-28084325 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 380-695 |
| Cow position: | chr26:11851655-11851978 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 155 |
| Conread position: | 392-558 |
| Cow position: | chr26:5675475-5675643 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 392-730 |
| Cow position: | chr26:19351198-19350861 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-731 |
| Cow position: | chr26:6849121-6848788 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 392-732 |
| Cow position: | chr26:9563042-9562699 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 393-730 |
| Cow position: | chr26:17396614-17396261 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 394-639 |
| Cow position: | chr26:18855401-18855649 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 111, 21 |
| Conread position: | 394-732 |
| Cow position: | chr26:18852532-18852873 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 399-731 |
| Cow position: | chr26:17680464-17680128 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 399-732 |
| Cow position: | chr26:3030512-3030175 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 401-534 |
| Cow position: | chr26:12574083-12573951 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-723 |
| Cow position: | chr26:4604862-4604535 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 140, 14 |
| Conread position: | 401-732 |
| Cow position: | chr26:30589046-30588713 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 14 |
| Conread position: | 402-544 |
| Cow position: | chr26:23603183-23603040 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 410-686 |
| Cow position: | chr26:11253730-11253450 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 112 |
| Conread position: | 410-732 |
| Cow position: | chr26:12588239-12587912 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 411-732 |
| Cow position: | chr26:2198954-2199279 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 411-732 |
| Cow position: | chr26:30783071-30783396 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 412-732 |
| Cow position: | chr26:4806233-4805908 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 422-732 |
| Cow position: | chr26:2352021-2351709 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 86 |
| Conread position: | 422-732 |
| Cow position: | chr26:8919189-8919501 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 274 |
| Conread position: | 422-732 |
| Cow position: | chr26:15144421-15144107 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 429-732 |
| Cow position: | chr26:8870228-8870528 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 111 |
| Conread position: | 432-534 |
| Cow position: | chr26:23108252-23108354 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-582 |
| Cow position: | chr26:9113088-9113239 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 439-696 |
| Cow position: | chr26:27384496-27384756 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 458-732 |
| Cow position: | chr26:9844514-9844248 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 146, 85 |
| Conread position: | 474-732 |
| Cow position: | chr26:21826288-21826027 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 146 |
| Conread position: | 485-731 |
| Cow position: | chr26:17996200-17995944 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 111 |
Show alignments to all cow chromosomes.