Cow genome map

Conread name: Ss1.1-rcbl0_018973.5

Conread position: 1-472
Cow position:
Alignm length: 476
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 43

Conread position: 235-496
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 14, 104

Conread position: 236-435
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 47, 91

Conread position: 238-464
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 40, 149

Conread position: 276-724
Cow position:
Alignm length: 456
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 69

Conread position: 373-721
Cow position:
Alignm length: 363
Alignm identity: 234
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 9

Conread position: 380-695
Cow position:
Alignm length: 326
Alignm identity: 207
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 155

Conread position: 392-558
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 50

Conread position: 392-730
Cow position:
Alignm length: 344
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-731
Cow position:
Alignm length: 345
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 18

Conread position: 392-732
Cow position:
Alignm length: 347
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 47

Conread position: 393-730
Cow position:
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 46

Conread position: 394-639
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 111, 21

Conread position: 394-732
Cow position:
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 21

Conread position: 399-731
Cow position:
Alignm length: 341
Alignm identity: 225
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 39

Conread position: 399-732
Cow position:
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 401-534
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 14

Conread position: 401-723
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 140, 14

Conread position: 401-732
Cow position:
Alignm length: 336
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 14

Conread position: 402-544
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 13

Conread position: 410-686
Cow position:
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 112

Conread position: 410-732
Cow position:
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 412-732
Cow position:
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 422-732
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 86

Conread position: 422-732
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 274

Conread position: 422-732
Cow position:
Alignm length: 315
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 429-732
Cow position:
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 111

Conread position: 432-534
Cow position:
Alignm length: 103
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 433-582
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 439-696
Cow position:
Alignm length: 267
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 83

Conread position: 458-732
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 146, 85

Conread position: 474-732
Cow position:
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 146

Conread position: 485-731
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 111

Show alignments to all cow chromosomes.