Cow genome map


           Conread name:
           Ss1.1-rcbl0_018973.5
        

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               105, 42
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 63
               

               Conread position:
               1-571
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               1-687
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 68
               

               Conread position:
               1-732
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 42
               

               Conread position:
               1-732
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 55
               

               Conread position:
               10-474
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               323
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               268, 77
               

               Conread position:
               19-731
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 50
               

               Conread position:
               133-426
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               129, 258
               

               Conread position:
               160-391
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               171-711
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               172-515
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               185-688
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               233-466
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               45, 231
               

               Conread position:
               261-675
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 160
               

               Conread position:
               262-730
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               278-596
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 100
               

               Conread position:
               283-617
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               283-732
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 99
               

               Conread position:
               291-522
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               291-697
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               278
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               86, 75
               

               Conread position:
               296-500
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               18, 150
               

               Conread position:
               296-702
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 46
               

               Conread position:
               299-485
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               152
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               307-723
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               324-701
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               327-703
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 59
               

               Conread position:
               353-695
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               378-630
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               392-587
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-680
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               392-696
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-696
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-724
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-728
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-729
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-731
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 46
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               392-732
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               393-704
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               393-731
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               393-732
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               396-732
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 43
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 41
               

               Conread position:
               401-536
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               401-537
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               401-730
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               401-732
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 31
               

               Conread position:
               401-732
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 37
               

               Conread position:
               401-732
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               409-553
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               411-689
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               411-732
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               411-732
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 31
               

               Conread position:
               422-732
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 86
               

               Conread position:
               429-732
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               429-732
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               431-708
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 89
               

               Conread position:
               442-728
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 104
               

               Conread position:
               446-732
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 75
               

               Conread position:
               447-732
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               457-708
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               459-640
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               459-732
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               464-731
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               138, 54
               

               Conread position:
               469-732
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               72, 169
               

               Conread position:
               470-672
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               134, 71
               

               Conread position:
               472-695
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 77
               

               Conread position:
               474-653
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 90
               

               Conread position:
               491-732
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               503-654
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               530-732
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 130
               

               Conread position:
               540-696
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 58
               

               Conread position:
               557-732
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               586-732
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               594-698
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               6, 0
               
Show alignments to all cow chromosomes.