Cow genome map

Conread name: Ss1.1-rcbl0_018973.5

Conread position: 1-193
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 102, 61

Conread position: 1-272
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 68

Conread position: 1-732
Cow position:
Alignm length: 744
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 76

Conread position: 187-732
Cow position:
Alignm length: 564
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 16

Conread position: 221-706
Cow position:
Alignm length: 495
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 62

Conread position: 245-676
Cow position:
Alignm length: 448
Alignm identity: 289
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 175

Conread position: 260-731
Cow position:
Alignm length: 479
Alignm identity: 309
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 97

Conread position: 262-732
Cow position:
Alignm length: 492
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 137

Conread position: 265-500
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 221

Conread position: 277-722
Cow position:
Alignm length: 451
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 59

Conread position: 278-532
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 115

Conread position: 279-730
Cow position:
Alignm length: 465
Alignm identity: 309
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 92

Conread position: 304-707
Cow position:
Alignm length: 409
Alignm identity: 257
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 77

Conread position: 305-709
Cow position:
Alignm length: 421
Alignm identity: 267
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 156

Conread position: 323-731
Cow position:
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 30

Conread position: 330-703
Cow position:
Alignm length: 390
Alignm identity: 248
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 107

Conread position: 330-732
Cow position:
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 11

Conread position: 331-719
Cow position:
Alignm length: 396
Alignm identity: 255
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 89, 55

Conread position: 344-686
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 58

Conread position: 354-657
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 30

Conread position: 360-522
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 369-730
Cow position:
Alignm length: 367
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 51

Conread position: 392-704
Cow position:
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 392-706
Cow position:
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-707
Cow position:
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 392-730
Cow position:
Alignm length: 344
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-731
Cow position:
Alignm length: 347
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 345
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 392-732
Cow position:
Alignm length: 347
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 348
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 18

Conread position: 392-732
Cow position:
Alignm length: 347
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 345
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 12

Conread position: 392-732
Cow position:
Alignm length: 347
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 394-731
Cow position:
Alignm length: 344
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 46

Conread position: 396-585
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 19

Conread position: 396-732
Cow position:
Alignm length: 341
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 397-530
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 43

Conread position: 398-696
Cow position:
Alignm length: 304
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 398-732
Cow position:
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 399-732
Cow position:
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 23

Conread position: 401-530
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 14

Conread position: 401-530
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 14

Conread position: 401-544
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 15

Conread position: 401-557
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 23, 14

Conread position: 401-640
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 14

Conread position: 401-664
Cow position:
Alignm length: 268
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 37

Conread position: 401-687
Cow position:
Alignm length: 293
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 37

Conread position: 401-714
Cow position:
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 14

Conread position: 401-719
Cow position:
Alignm length: 323
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 14

Conread position: 401-730
Cow position:
Alignm length: 341
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 37

Conread position: 401-730
Cow position:
Alignm length: 334
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 37

Conread position: 401-732
Cow position:
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 8

Conread position: 401-732
Cow position:
Alignm length: 336
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 37

Conread position: 401-732
Cow position:
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 306

Conread position: 401-732
Cow position:
Alignm length: 337
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 14

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 148

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 206

Conread position: 416-731
Cow position:
Alignm length: 324
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 20

Conread position: 422-732
Cow position:
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 271

Conread position: 422-732
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 47

Conread position: 422-732
Cow position:
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 98

Conread position: 428-732
Cow position:
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 429-703
Cow position:
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 81

Conread position: 429-731
Cow position:
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 429-731
Cow position:
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 429-732
Cow position:
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 79

Conread position: 439-732
Cow position:
Alignm length: 297
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 453-708
Cow position:
Alignm length: 263
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 27

Conread position: 456-725
Cow position:
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 83, 190

Conread position: 491-724
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 48, 26

Conread position: 498-691
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 40

Conread position: 499-690
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 126

Conread position: 512-731
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 567-732
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 605-731
Cow position:
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 619-732
Cow position:
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.