Cow genome map
Conread name: | Ss1.1-rcbl0_018973.5 |
Conread position: | 1-281 |
Cow position: | chr4:60264636-60264361 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 267, 68 |
Conread position: | 1-291 |
Cow position: | chr4:21338071-21337789 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 210 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 261, 68 |
Conread position: | 1-703 |
Cow position: | chr4:28830961-28831640 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 79 |
Conread position: | 1-731 |
Cow position: | chr4:46664123-46664843 (view UCSC Genome Browser custom track) |
Alignm length: | 744 |
Alignm identity: | 566 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 68 |
Conread position: | 77-630 |
Cow position: | chr4:14549667-14550204 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 369 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 68, 48 |
Conread position: | 169-702 |
Cow position: | chr4:54158416-54158926 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 351 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 30, 19 |
Conread position: | 251-640 |
Cow position: | chr4:45256771-45256378 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 251 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 108, 32 |
Conread position: | 264-634 |
Cow position: | chr4:11385620-11385969 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 257 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 66, 13 |
Conread position: | 278-696 |
Cow position: | chr4:34184637-34184242 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 40 |
Conread position: | 278-732 |
Cow position: | chr4:60264287-60263837 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 59 |
Conread position: | 283-695 |
Cow position: | chr4:14374802-14374382 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 270 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 23, 7 |
Conread position: | 283-697 |
Cow position: | chr4:968756-968355 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 288 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 51, 7 |
Conread position: | 284-731 |
Cow position: | chr4:45876791-45876343 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 303 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 194, 52 |
Conread position: | 290-728 |
Cow position: | chr4:51043375-51042933 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 142 |
Conread position: | 290-730 |
Cow position: | chr4:1496493-1496070 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 16 |
Conread position: | 296-731 |
Cow position: | chr4:44925637-44925193 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 306 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 42, 51 |
Conread position: | 303-537 |
Cow position: | chr4:62566857-62567092 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 168 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 17, 85 |
Conread position: | 316-705 |
Cow position: | chr4:15194528-15194906 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 271 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 54, 31 |
Conread position: | 317-720 |
Cow position: | chr4:38929334-38929733 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 264 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 102, 53 |
Conread position: | 326-701 |
Cow position: | chr4:19251472-19251844 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 261 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 25, 31 |
Conread position: | 328-697 |
Cow position: | chr4:13869953-13870305 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 258 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 27, 56 |
Conread position: | 330-707 |
Cow position: | chr4:22472458-22472828 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 18 |
Conread position: | 343-731 |
Cow position: | chr4:19093366-19093746 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 267 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 195, 47 |
Conread position: | 354-730 |
Cow position: | chr4:14821600-14821229 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 88 |
Conread position: | 356-731 |
Cow position: | chr4:43454623-43454991 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 14 |
Conread position: | 357-719 |
Cow position: | chr4:50980179-50980526 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 234 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 198, 10 |
Conread position: | 381-669 |
Cow position: | chr4:12607684-12607406 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 86 |
Conread position: | 383-731 |
Cow position: | chr4:11837667-11837324 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 243 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 29, 114 |
Conread position: | 391-544 |
Cow position: | chr4:61256885-61257037 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 116 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 11, 44 |
Conread position: | 392-537 |
Cow position: | chr4:47717621-47717475 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 8, 24 |
Conread position: | 392-655 |
Cow position: | chr4:12587284-12587551 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-704 |
Cow position: | chr4:16359869-16360183 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 26 |
Conread position: | 392-707 |
Cow position: | chr4:43881094-43881413 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-728 |
Cow position: | chr4:18516883-18517218 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 35 |
Conread position: | 392-728 |
Cow position: | chr4:25599516-25599177 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 24 |
Conread position: | 392-730 |
Cow position: | chr4:31565318-31564981 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 24 |
Conread position: | 392-730 |
Cow position: | chr4:31669257-31669596 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-730 |
Cow position: | chr4:44725069-44725411 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-732 |
Cow position: | chr4:355895-356231 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 24 |
Conread position: | 392-732 |
Cow position: | chr4:6490379-6490040 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-732 |
Cow position: | chr4:12241232-12240886 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-732 |
Cow position: | chr4:17926269-17925924 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-732 |
Cow position: | chr4:36896353-36896697 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-732 |
Cow position: | chr4:41120289-41120645 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-732 |
Cow position: | chr4:43319661-43319317 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-732 |
Cow position: | chr4:45049313-45048969 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 47 |
Conread position: | 392-732 |
Cow position: | chr4:48026382-48026728 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 24 |
Conread position: | 394-732 |
Cow position: | chr4:16326792-16326452 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 10 |
Conread position: | 395-728 |
Cow position: | chr4:47255011-47254689 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 238 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 30, 21 |
Conread position: | 398-540 |
Cow position: | chr4:66925988-66926130 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 26, 17 |
Conread position: | 398-697 |
Cow position: | chr4:4176785-4177083 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 216 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 125, 6 |
Conread position: | 399-732 |
Cow position: | chr4:26886867-26886532 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 39 |
Conread position: | 401-544 |
Cow position: | chr4:11618846-11618985 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 14 |
Conread position: | 401-650 |
Cow position: | chr4:33493820-33494072 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 37 |
Conread position: | 401-725 |
Cow position: | chr4:39271398-39271063 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 216 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 401-731 |
Cow position: | chr4:4416069-4416396 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 50 |
Conread position: | 410-595 |
Cow position: | chr4:602989-603178 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 410-732 |
Cow position: | chr4:13548025-13548351 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 146 |
Conread position: | 410-732 |
Cow position: | chr4:32212165-32212490 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 12 |
Conread position: | 411-719 |
Cow position: | chr4:41954472-41954783 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 55 |
Conread position: | 411-719 |
Cow position: | chr4:41958127-41958438 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 55 |
Conread position: | 411-732 |
Cow position: | chr4:3125793-3126118 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 411-732 |
Cow position: | chr4:18190403-18190728 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 411-732 |
Cow position: | chr4:18424527-18424202 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 420-610 |
Cow position: | chr4:27333441-27333635 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 147 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 421-732 |
Cow position: | chr4:11111403-11111093 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 11 |
Conread position: | 422-732 |
Cow position: | chr4:100925-100611 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 422-732 |
Cow position: | chr4:5880174-5880488 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 234 |
Conread position: | 427-718 |
Cow position: | chr4:64984365-64984657 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 206 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 29, 118 |
Conread position: | 428-732 |
Cow position: | chr4:9354761-9354454 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 268 |
Conread position: | 429-556 |
Cow position: | chr4:158531-158660 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 429-620 |
Cow position: | chr4:65223518-65223323 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 149 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 429-732 |
Cow position: | chr4:1930608-1930302 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 102 |
Conread position: | 429-732 |
Cow position: | chr4:6268616-6268305 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 433-732 |
Cow position: | chr4:16056621-16056923 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 90 |
Conread position: | 441-694 |
Cow position: | chr4:21256382-21256640 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 178 |
Conread position: | 454-732 |
Cow position: | chr4:33072780-33072498 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 462-731 |
Cow position: | chr4:27295463-27295183 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 199 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 463-730 |
Cow position: | chr4:13493365-13493639 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 470-731 |
Cow position: | chr4:6616023-6615760 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 170 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 69, 151 |
Conread position: | 479-731 |
Cow position: | chr4:57984053-57984309 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 534-731 |
Cow position: | chr4:17587537-17587345 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 139 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 534-732 |
Cow position: | chr4:29531753-29531557 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 154 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 10, 113 |
Conread position: | 546-730 |
Cow position: | chr4:529533-529720 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 144 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 547-732 |
Cow position: | chr4:159291-159476 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 142 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 57, 147 |
Conread position: | 604-730 |
Cow position: | chr4:27333903-27334029 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 625-732 |
Cow position: | chr4:41332929-41333036 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 93 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.