Cow genome map
| Conread name: | Ss1.1-rcbl0_018973.5 |
| Conread position: | 1-178 |
| Cow position: | chr6:10641327-10641500 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 61 |
| Conread position: | 1-363 |
| Cow position: | chr6:43608190-43607834 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 107, 43 |
| Conread position: | 1-565 |
| Cow position: | chr6:6476321-6475762 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 71 |
| Conread position: | 2-318 |
| Cow position: | chr6:37116304-37116603 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 88, 67 |
| Conread position: | 2-476 |
| Cow position: | chr6:38232446-38232901 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 127-502 |
| Cow position: | chr6:42616417-42616793 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 132-429 |
| Cow position: | chr6:536080-536377 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 133-725 |
| Cow position: | chr6:7179317-7178717 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 168-492 |
| Cow position: | chr6:35434143-35434454 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 186-725 |
| Cow position: | chr6:66541636-66542198 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 370 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 196-698 |
| Cow position: | chr6:10643563-10644079 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 247 |
| Conread position: | 199-732 |
| Cow position: | chr6:1100144-1099619 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 13 |
| Conread position: | 233-488 |
| Cow position: | chr6:1383406-1383156 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 233-732 |
| Cow position: | chr6:15476966-15477470 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 27 |
| Conread position: | 262-728 |
| Cow position: | chr6:2887272-2887742 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 13 |
| Conread position: | 268-686 |
| Cow position: | chr6:33995223-33994808 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 138 |
| Conread position: | 288-625 |
| Cow position: | chr6:17245431-17245098 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 103 |
| Conread position: | 295-703 |
| Cow position: | chr6:8021047-8021449 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 306-695 |
| Cow position: | chr6:60169040-60168649 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 307-731 |
| Cow position: | chr6:31566063-31565633 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 319-720 |
| Cow position: | chr6:44904635-44905039 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 276 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 331-706 |
| Cow position: | chr6:34005212-34004857 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 336-695 |
| Cow position: | chr6:39051052-39050702 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 207, 50 |
| Conread position: | 338-731 |
| Cow position: | chr6:66231977-66232374 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 63 |
| Conread position: | 348-719 |
| Cow position: | chr6:38900995-38900619 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 152 |
| Conread position: | 349-732 |
| Cow position: | chr6:35419674-35419286 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 354-697 |
| Cow position: | chr6:44550912-44550567 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 295 |
| Conread position: | 360-596 |
| Cow position: | chr6:43607505-43607276 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 181, 18 |
| Conread position: | 373-719 |
| Cow position: | chr6:12529682-12530034 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 193 |
| Conread position: | 377-669 |
| Cow position: | chr6:19337374-19337088 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 162, 29 |
| Conread position: | 381-732 |
| Cow position: | chr6:65928173-65928530 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 382-668 |
| Cow position: | chr6:3544693-3544986 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 8, 239 |
| Conread position: | 385-732 |
| Cow position: | chr6:7141267-7140903 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 391-559 |
| Cow position: | chr6:26044748-26044910 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 391-715 |
| Cow position: | chr6:48707917-48707589 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 144, 15 |
| Conread position: | 391-730 |
| Cow position: | chr6:1822410-1822070 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 18 |
| Conread position: | 391-732 |
| Cow position: | chr6:40554357-40554020 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 18 |
| Conread position: | 391-732 |
| Cow position: | chr6:52693244-52693587 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 392-677 |
| Cow position: | chr6:30100253-30100548 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 392-696 |
| Cow position: | chr6:3277728-3277425 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 392-704 |
| Cow position: | chr6:25214476-25214794 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-722 |
| Cow position: | chr6:8201959-8202292 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-728 |
| Cow position: | chr6:47042977-47042637 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 392-728 |
| Cow position: | chr6:55544105-55543764 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 392-732 |
| Cow position: | chr6:913875-914194 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 392-732 |
| Cow position: | chr6:3889256-3888923 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 392-732 |
| Cow position: | chr6:8761083-8760740 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 392-732 |
| Cow position: | chr6:15140958-15140623 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 392-732 |
| Cow position: | chr6:15280330-15279997 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 392-732 |
| Cow position: | chr6:17046277-17046619 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 6 |
| Conread position: | 392-732 |
| Cow position: | chr6:27529785-27529442 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr6:30274957-30274618 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr6:34892784-34892441 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr6:35876496-35876154 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 392-732 |
| Cow position: | chr6:39437769-39438105 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 393-729 |
| Cow position: | chr6:36526273-36526611 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 23 |
| Conread position: | 393-730 |
| Cow position: | chr6:65841811-65842142 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 394-732 |
| Cow position: | chr6:10499505-10499165 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 10 |
| Conread position: | 396-530 |
| Cow position: | chr6:42927563-42927697 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 396-576 |
| Cow position: | chr6:12092648-12092464 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 398-601 |
| Cow position: | chr6:4508196-4507993 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 144, 16 |
| Conread position: | 401-544 |
| Cow position: | chr6:33389074-33389217 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-546 |
| Cow position: | chr6:10558428-10558283 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-546 |
| Cow position: | chr6:19454147-19454292 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-555 |
| Cow position: | chr6:702182-702337 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 140, 37 |
| Conread position: | 401-730 |
| Cow position: | chr6:28105619-28105296 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 17 |
| Conread position: | 401-731 |
| Cow position: | chr6:5949547-5949216 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 37 |
| Conread position: | 401-732 |
| Cow position: | chr6:6566837-6567153 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 8 |
| Conread position: | 401-732 |
| Cow position: | chr6:13317273-13316942 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 15 |
| Conread position: | 401-732 |
| Cow position: | chr6:24239297-24239616 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 38 |
| Conread position: | 401-732 |
| Cow position: | chr6:29311723-29312057 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 37 |
| Conread position: | 401-732 |
| Cow position: | chr6:30479331-30479664 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 302 |
| Conread position: | 401-732 |
| Cow position: | chr6:40867329-40867001 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 14 |
| Conread position: | 401-732 |
| Cow position: | chr6:58026985-58027313 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 14 |
| Conread position: | 402-722 |
| Cow position: | chr6:64715462-64715784 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 13 |
| Conread position: | 402-732 |
| Cow position: | chr6:20560879-20560547 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 36 |
| Conread position: | 403-544 |
| Cow position: | chr6:65007920-65008059 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 406-684 |
| Cow position: | chr6:65881140-65881423 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 406-732 |
| Cow position: | chr6:13944136-13944466 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 406-732 |
| Cow position: | chr6:44150327-44149997 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 407-728 |
| Cow position: | chr6:28063566-28063890 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 213 |
| Conread position: | 409-732 |
| Cow position: | chr6:24323149-24322822 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 409-732 |
| Cow position: | chr6:69221978-69221651 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 410-732 |
| Cow position: | chr6:331235-330907 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 411-529 |
| Cow position: | chr6:59919044-59918926 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 411-732 |
| Cow position: | chr6:13104292-13104616 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 147 |
| Conread position: | 411-732 |
| Cow position: | chr6:17598045-17597732 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 110 |
| Conread position: | 411-732 |
| Cow position: | chr6:39908761-39909086 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 209 |
| Conread position: | 412-732 |
| Cow position: | chr6:65821892-65821563 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 320 |
| Conread position: | 419-731 |
| Cow position: | chr6:65914444-65914755 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 63 |
| Conread position: | 420-732 |
| Cow position: | chr6:28275227-28275542 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 18 |
| Conread position: | 422-578 |
| Cow position: | chr6:58408667-58408509 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 422-655 |
| Cow position: | chr6:28491269-28491036 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 119, 178 |
| Conread position: | 422-731 |
| Cow position: | chr6:43617960-43618273 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 422-732 |
| Cow position: | chr6:2374945-2375260 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 422-732 |
| Cow position: | chr6:16052124-16052439 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 422-732 |
| Cow position: | chr6:27169826-27170139 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 204 |
| Conread position: | 422-732 |
| Cow position: | chr6:40251908-40252220 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 56 |
| Conread position: | 422-732 |
| Cow position: | chr6:40275333-40275647 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 423-702 |
| Cow position: | chr6:10631306-10631590 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 427-732 |
| Cow position: | chr6:13847276-13847585 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 11 |
| Conread position: | 429-730 |
| Cow position: | chr6:68027044-68027347 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 60 |
| Conread position: | 429-732 |
| Cow position: | chr6:1411688-1411384 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 39 |
| Conread position: | 439-732 |
| Cow position: | chr6:51086208-51086504 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 187 |
| Conread position: | 443-709 |
| Cow position: | chr6:64788595-64788857 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 446-732 |
| Cow position: | chr6:14852308-14852018 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 147 |
| Conread position: | 449-732 |
| Cow position: | chr6:12666041-12665760 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 453-723 |
| Cow position: | chr6:40315666-40315939 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 238 |
| Conread position: | 455-732 |
| Cow position: | chr6:25794053-25794332 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 102 |
| Conread position: | 456-732 |
| Cow position: | chr6:27470883-27471161 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 253 |
| Conread position: | 461-732 |
| Cow position: | chr6:43793426-43793150 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 119 |
| Conread position: | 462-732 |
| Cow position: | chr6:44032077-44032351 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 463-732 |
| Cow position: | chr6:11724818-11724548 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 465-683 |
| Cow position: | chr6:41656991-41656773 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 158 |
| Conread position: | 469-722 |
| Cow position: | chr6:67210318-67210064 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 469-732 |
| Cow position: | chr6:26670575-26670309 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 212 |
| Conread position: | 473-732 |
| Cow position: | chr6:38233136-38233395 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 86 |
| Conread position: | 475-732 |
| Cow position: | chr6:21972956-21973216 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 478-732 |
| Cow position: | chr6:185481-185224 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 485-732 |
| Cow position: | chr6:40813357-40813107 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 515-720 |
| Cow position: | chr6:58600825-58601032 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 517-732 |
| Cow position: | chr6:59918729-59918512 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 529-732 |
| Cow position: | chr6:11274561-11274365 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 531-731 |
| Cow position: | chr6:3488063-3487864 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 73, 175 |
| Conread position: | 535-702 |
| Cow position: | chr6:6544578-6544747 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 538-732 |
| Cow position: | chr6:186106-185910 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 540-732 |
| Cow position: | chr6:10500665-10500858 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 64, 107 |
| Conread position: | 541-721 |
| Cow position: | chr6:26044916-26045098 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 63, 161 |
| Conread position: | 555-732 |
| Cow position: | chr6:6475486-6475313 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 560-729 |
| Cow position: | chr6:40326295-40326126 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 562-732 |
| Cow position: | chr6:51714091-51714259 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 567-732 |
| Cow position: | chr6:40973675-40973837 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 133 |
| Conread position: | 591-732 |
| Cow position: | chr6:702328-702472 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 592-732 |
| Cow position: | chr6:28133357-28133496 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 594-703 |
| Cow position: | chr6:48369244-48369352 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 604-728 |
| Cow position: | chr6:32330090-32329967 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 616-697 |
| Cow position: | chr6:60360468-60360387 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 73 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 616-730 |
| Cow position: | chr6:33258-33144 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 635-732 |
| Cow position: | chr6:28491103-28491006 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.