Cow genome map
| Conread name: | Ss1.1-rcbl0_018973.5 |
| Conread position: | 1-732 |
| Cow position: | chr9:13477125-13476392 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 1-732 |
| Cow position: | chr9:44817956-44818665 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 18-246 |
| Cow position: | chr9:44794577-44794796 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 57-395 |
| Cow position: | chr9:13222564-13222894 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 305, 62 |
| Conread position: | 127-549 |
| Cow position: | chr9:2475784-2476211 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 36 |
| Conread position: | 154-642 |
| Cow position: | chr9:240602-240124 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 182, 6 |
| Conread position: | 155-653 |
| Cow position: | chr9:7012635-7013122 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 160-732 |
| Cow position: | chr9:1635880-1636439 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 34 |
| Conread position: | 173-697 |
| Cow position: | chr9:28688025-28688564 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 39 |
| Conread position: | 186-468 |
| Cow position: | chr9:34721415-34721701 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 79 |
| Conread position: | 186-732 |
| Cow position: | chr9:3803274-3803831 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 216 |
| Conread position: | 204-731 |
| Cow position: | chr9:9705512-9706037 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 108 |
| Conread position: | 218-722 |
| Cow position: | chr9:64119207-64119700 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 119 |
| Conread position: | 221-542 |
| Cow position: | chr9:2001031-2000701 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 217 |
| Conread position: | 233-468 |
| Cow position: | chr9:44795059-44795297 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 233-532 |
| Cow position: | chr9:2204047-2204332 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 52 |
| Conread position: | 246-728 |
| Cow position: | chr9:4281772-4282262 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 275 |
| Conread position: | 249-676 |
| Cow position: | chr9:250061-249643 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 137 |
| Conread position: | 251-732 |
| Cow position: | chr9:30487563-30488062 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 61 |
| Conread position: | 252-472 |
| Cow position: | chr9:43663570-43663787 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 104 |
| Conread position: | 254-632 |
| Cow position: | chr9:3354667-3354290 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 265-695 |
| Cow position: | chr9:4651092-4650658 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 93 |
| Conread position: | 277-731 |
| Cow position: | chr9:29328701-29329148 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 284-731 |
| Cow position: | chr9:59511428-59511876 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 7 |
| Conread position: | 284-732 |
| Cow position: | chr9:5514461-5514911 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 125 |
| Conread position: | 286-719 |
| Cow position: | chr9:26683581-26684015 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 290-702 |
| Cow position: | chr9:3393556-3393151 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 260, 52 |
| Conread position: | 295-578 |
| Cow position: | chr9:63854629-63854915 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 295-719 |
| Cow position: | chr9:3937368-3936955 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 186 |
| Conread position: | 296-731 |
| Cow position: | chr9:7091052-7091484 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 301-487 |
| Cow position: | chr9:6110494-6110308 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 301-653 |
| Cow position: | chr9:55618240-55618605 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 302-732 |
| Cow position: | chr9:47544812-47545227 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 290 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 303-704 |
| Cow position: | chr9:2052820-2053222 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 309-732 |
| Cow position: | chr9:2488069-2487630 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 300 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 314-707 |
| Cow position: | chr9:37095602-37095989 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 73 |
| Conread position: | 315-732 |
| Cow position: | chr9:6249387-6249788 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 320-717 |
| Cow position: | chr9:20309067-20308676 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 327-732 |
| Cow position: | chr9:222445-222040 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 328-731 |
| Cow position: | chr9:42556006-42556415 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 195 |
| Conread position: | 329-732 |
| Cow position: | chr9:59425858-59426259 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 53 |
| Conread position: | 338-732 |
| Cow position: | chr9:60464530-60464146 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 14 |
| Conread position: | 364-732 |
| Cow position: | chr9:42569017-42569391 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 283 |
| Conread position: | 368-652 |
| Cow position: | chr9:21381175-21380888 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 369-695 |
| Cow position: | chr9:12061685-12062018 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 391-725 |
| Cow position: | chr9:2186116-2186444 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 392-509 |
| Cow position: | chr9:32969118-32969235 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-701 |
| Cow position: | chr9:37971059-37970751 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 40 |
| Conread position: | 392-713 |
| Cow position: | chr9:6050897-6050575 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 392-719 |
| Cow position: | chr9:7002933-7003264 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-725 |
| Cow position: | chr9:7061941-7061607 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 392-730 |
| Cow position: | chr9:4532642-4532984 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 48 |
| Conread position: | 392-732 |
| Cow position: | chr9:2171209-2171551 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 392-732 |
| Cow position: | chr9:6830358-6830015 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 392-732 |
| Cow position: | chr9:10321959-10322293 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr9:16175918-16176260 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr9:29028050-29027713 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr9:29628596-29628258 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr9:37162664-37162325 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 131 |
| Conread position: | 392-732 |
| Cow position: | chr9:47002340-47002684 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 392-732 |
| Cow position: | chr9:59174009-59173658 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 392-732 |
| Cow position: | chr9:59536246-59536585 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 392-732 |
| Cow position: | chr9:60277871-60277527 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 393-732 |
| Cow position: | chr9:1980140-1980479 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 23 |
| Conread position: | 393-732 |
| Cow position: | chr9:22653718-22654061 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 398-732 |
| Cow position: | chr9:9013256-9013590 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 40 |
| Conread position: | 400-732 |
| Cow position: | chr9:28021956-28022293 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 401-526 |
| Cow position: | chr9:9985552-9985676 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-540 |
| Cow position: | chr9:8968796-8968658 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-544 |
| Cow position: | chr9:10315528-10315667 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-544 |
| Cow position: | chr9:37063642-37063499 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 401-557 |
| Cow position: | chr9:37129384-37129233 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 401-620 |
| Cow position: | chr9:1995753-1995532 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 14 |
| Conread position: | 401-683 |
| Cow position: | chr9:25023140-25022858 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 37 |
| Conread position: | 401-730 |
| Cow position: | chr9:18509642-18509312 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 37 |
| Conread position: | 401-731 |
| Cow position: | chr9:3566691-3566348 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 8 |
| Conread position: | 401-732 |
| Cow position: | chr9:5004155-5004470 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 17 |
| Conread position: | 401-732 |
| Cow position: | chr9:30672529-30672855 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 13 |
| Conread position: | 401-732 |
| Cow position: | chr9:51182033-51181696 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 401-732 |
| Cow position: | chr9:59444011-59444337 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 31 |
| Conread position: | 402-544 |
| Cow position: | chr9:3156185-3156324 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 406-541 |
| Cow position: | chr9:34242441-34242306 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 406-640 |
| Cow position: | chr9:25484029-25484267 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 406-732 |
| Cow position: | chr9:36724658-36724990 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 406-732 |
| Cow position: | chr9:45873505-45873834 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 123 |
| Conread position: | 406-732 |
| Cow position: | chr9:64018303-64017973 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 407-732 |
| Cow position: | chr9:27034847-27035171 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 31 |
| Conread position: | 409-717 |
| Cow position: | chr9:49177666-49177354 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 409-732 |
| Cow position: | chr9:31064594-31064921 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 409-732 |
| Cow position: | chr9:42309850-42310176 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 410-732 |
| Cow position: | chr9:51210843-51211170 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 411-639 |
| Cow position: | chr9:60651549-60651317 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 411-723 |
| Cow position: | chr9:131026-130709 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 411-732 |
| Cow position: | chr9:25035682-25035357 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 411-732 |
| Cow position: | chr9:27934252-27934576 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 58 |
| Conread position: | 411-732 |
| Cow position: | chr9:28678136-28678461 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 420-521 |
| Cow position: | chr9:31021000-31021102 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 422-676 |
| Cow position: | chr9:25755049-25754792 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 234 |
| Conread position: | 422-732 |
| Cow position: | chr9:780630-780316 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 422-732 |
| Cow position: | chr9:3006070-3005756 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 198 |
| Conread position: | 424-732 |
| Cow position: | chr9:25187288-25187594 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 428-732 |
| Cow position: | chr9:17064208-17063899 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 429-610 |
| Cow position: | chr9:163322-163137 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 429-667 |
| Cow position: | chr9:16268553-16268795 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 432-732 |
| Cow position: | chr9:1076013-1075709 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 432-732 |
| Cow position: | chr9:1251810-1251509 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 184 |
| Conread position: | 432-732 |
| Cow position: | chr9:30826866-30827168 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 76 |
| Conread position: | 438-691 |
| Cow position: | chr9:6974917-6975184 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 438-732 |
| Cow position: | chr9:28439999-28440296 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 182 |
| Conread position: | 443-707 |
| Cow position: | chr9:3167156-3167413 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 161, 34 |
| Conread position: | 460-731 |
| Cow position: | chr9:31807782-31808058 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 460-732 |
| Cow position: | chr9:43664045-43664301 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 215, 19 |
| Conread position: | 462-728 |
| Cow position: | chr9:59455046-59454781 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 185 |
| Conread position: | 462-732 |
| Cow position: | chr9:50790928-50791200 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 234 |
| Conread position: | 463-732 |
| Cow position: | chr9:3543060-3543333 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 469-692 |
| Cow position: | chr9:9329873-9329647 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 472-701 |
| Cow position: | chr9:9465014-9464782 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 183 |
| Conread position: | 478-731 |
| Cow position: | chr9:34722146-34722392 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 122, 43 |
| Conread position: | 498-695 |
| Cow position: | chr9:44795528-44795727 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 161 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 46, 194 |
| Conread position: | 531-731 |
| Cow position: | chr9:32969234-32969438 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 533-719 |
| Cow position: | chr9:14762158-14761971 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 533-732 |
| Cow position: | chr9:3998301-3998500 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 540-732 |
| Cow position: | chr9:2205256-2205442 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 167, 7 |
| Conread position: | 541-732 |
| Cow position: | chr9:4943515-4943324 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 609-732 |
| Cow position: | chr9:59482434-59482312 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 628-732 |
| Cow position: | chr9:40223673-40223777 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.