Cow genome map

Conread name: Ss1.1-rcbl0_018973.5

Conread position: 1-732
Cow position:
Alignm length: 746
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 68

Conread position: 1-732
Cow position:
Alignm length: 742
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 68

Conread position: 18-246
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 44

Conread position: 57-395
Cow position:
Alignm length: 340
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 305, 62

Conread position: 127-549
Cow position:
Alignm length: 434
Alignm identity: 275
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 36

Conread position: 154-642
Cow position:
Alignm length: 493
Alignm identity: 314
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 182, 6

Conread position: 155-653
Cow position:
Alignm length: 508
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 8

Conread position: 160-732
Cow position:
Alignm length: 586
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 173-697
Cow position:
Alignm length: 545
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 39

Conread position: 186-468
Cow position:
Alignm length: 288
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 79

Conread position: 186-732
Cow position:
Alignm length: 567
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 216

Conread position: 204-731
Cow position:
Alignm length: 543
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 108

Conread position: 218-722
Cow position:
Alignm length: 512
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 119

Conread position: 221-542
Cow position:
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 217

Conread position: 233-468
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 45, 165

Conread position: 233-532
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 52

Conread position: 246-728
Cow position:
Alignm length: 493
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 275

Conread position: 249-676
Cow position:
Alignm length: 442
Alignm identity: 285
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 137

Conread position: 251-732
Cow position:
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 61

Conread position: 252-472
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 104

Conread position: 254-632
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 21

Conread position: 265-695
Cow position:
Alignm length: 441
Alignm identity: 287
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 93

Conread position: 277-731
Cow position:
Alignm length: 465
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 13

Conread position: 284-731
Cow position:
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 7

Conread position: 284-732
Cow position:
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 125

Conread position: 286-719
Cow position:
Alignm length: 446
Alignm identity: 277
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 36

Conread position: 290-702
Cow position:
Alignm length: 418
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 260, 52

Conread position: 295-578
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 74

Conread position: 295-719
Cow position:
Alignm length: 430
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 186

Conread position: 296-731
Cow position:
Alignm length: 451
Alignm identity: 298
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 29

Conread position: 301-487
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 68

Conread position: 301-653
Cow position:
Alignm length: 371
Alignm identity: 238
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 39

Conread position: 302-732
Cow position:
Alignm length: 437
Alignm identity: 290
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 15, 103

Conread position: 303-704
Cow position:
Alignm length: 413
Alignm identity: 260
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 72

Conread position: 309-732
Cow position:
Alignm length: 447
Alignm identity: 300
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 76

Conread position: 314-707
Cow position:
Alignm length: 404
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 73

Conread position: 315-732
Cow position:
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 52

Conread position: 320-717
Cow position:
Alignm length: 405
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 327-732
Cow position:
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 56

Conread position: 328-731
Cow position:
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 195

Conread position: 329-732
Cow position:
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 53

Conread position: 338-732
Cow position:
Alignm length: 397
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 14

Conread position: 364-732
Cow position:
Alignm length: 379
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 283

Conread position: 368-652
Cow position:
Alignm length: 290
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 30

Conread position: 369-695
Cow position:
Alignm length: 337
Alignm identity: 224
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 60

Conread position: 391-725
Cow position:
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 392-509
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 47

Conread position: 392-701
Cow position:
Alignm length: 314
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 40

Conread position: 392-713
Cow position:
Alignm length: 325
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 392-719
Cow position:
Alignm length: 333
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-725
Cow position:
Alignm length: 339
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 26

Conread position: 392-730
Cow position:
Alignm length: 344
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 392-732
Cow position:
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 23

Conread position: 392-732
Cow position:
Alignm length: 348
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 344
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 345
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 347
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 131

Conread position: 392-732
Cow position:
Alignm length: 346
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 392-732
Cow position:
Alignm length: 353
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 24

Conread position: 392-732
Cow position:
Alignm length: 344
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 18

Conread position: 392-732
Cow position:
Alignm length: 347
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 47

Conread position: 393-732
Cow position:
Alignm length: 344
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 23

Conread position: 393-732
Cow position:
Alignm length: 345
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 23

Conread position: 398-732
Cow position:
Alignm length: 339
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 40

Conread position: 400-732
Cow position:
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 401-526
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 14

Conread position: 401-540
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 14

Conread position: 401-544
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 14

Conread position: 401-544
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 14

Conread position: 401-557
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 14

Conread position: 401-620
Cow position:
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 14

Conread position: 401-683
Cow position:
Alignm length: 287
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 37

Conread position: 401-730
Cow position:
Alignm length: 335
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 37

Conread position: 401-731
Cow position:
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 8

Conread position: 401-732
Cow position:
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 17

Conread position: 401-732
Cow position:
Alignm length: 334
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 13

Conread position: 401-732
Cow position:
Alignm length: 340
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 401-732
Cow position:
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 31

Conread position: 402-544
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 406-541
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 406-640
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 406-732
Cow position:
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 406-732
Cow position:
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 123

Conread position: 406-732
Cow position:
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 407-732
Cow position:
Alignm length: 330
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 31

Conread position: 409-717
Cow position:
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 409-732
Cow position:
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 409-732
Cow position:
Alignm length: 328
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 410-732
Cow position:
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 411-639
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 130, 0

Conread position: 411-723
Cow position:
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 411-732
Cow position:
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 58

Conread position: 411-732
Cow position:
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 420-521
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 422-676
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 234

Conread position: 422-732
Cow position:
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 422-732
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 198

Conread position: 424-732
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 13

Conread position: 428-732
Cow position:
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 429-610
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 429-667
Cow position:
Alignm length: 243
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 432-732
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 432-732
Cow position:
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 184

Conread position: 432-732
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 76

Conread position: 438-691
Cow position:
Alignm length: 271
Alignm identity: 189
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 101, 62

Conread position: 438-732
Cow position:
Alignm length: 299
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 182

Conread position: 443-707
Cow position:
Alignm length: 269
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 161, 34

Conread position: 460-731
Cow position:
Alignm length: 277
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 460-732
Cow position:
Alignm length: 274
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 215, 19

Conread position: 462-728
Cow position:
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 185

Conread position: 462-732
Cow position:
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 234

Conread position: 463-732
Cow position:
Alignm length: 274
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 469-692
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 70, 22

Conread position: 472-701
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 69, 183

Conread position: 478-731
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 122, 43

Conread position: 498-695
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 194

Conread position: 531-731
Cow position:
Alignm length: 205
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 533-719
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 129

Conread position: 533-732
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 21

Conread position: 540-732
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 167, 7

Conread position: 541-732
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 63, 13

Conread position: 609-732
Cow position:
Alignm length: 124
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 628-732
Cow position:
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.