Cow genome map


           Conread name:
           Ss1.1-rcbl0_019726.5
        

               Conread position:
               163-470
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 133
               

               Conread position:
               172-400
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               172-402
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               172-437
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 121
               

               Conread position:
               172-466
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 108
               

               Conread position:
               172-472
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 136
               

               Conread position:
               172-472
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               80, 71
               

               Conread position:
               172-478
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 73
               

               Conread position:
               172-480
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               174-480
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 120
               

               Conread position:
               177-339
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               71, 115
               

               Conread position:
               177-394
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 128
               

               Conread position:
               177-437
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               177-449
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               177-456
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               177-456
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 115
               

               Conread position:
               179-472
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 89
               

               Conread position:
               180-448
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               62, 112
               

               Conread position:
               181-480
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               113, 109
               

               Conread position:
               182-442
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 124
               

               Conread position:
               184-468
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               54, 19
               

               Conread position:
               186-394
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               187-456
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               187-471
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               6, 18
               

               Conread position:
               187-472
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 11
               

               Conread position:
               187-480
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               102, 11
               

               Conread position:
               187-480
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               58, 12
               

               Conread position:
               189-365
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               102, 51
               

               Conread position:
               189-403
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 121
               

               Conread position:
               189-456
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 34
               

               Conread position:
               189-472
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 62
               

               Conread position:
               190-343
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               190-343
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 101
               

               Conread position:
               190-431
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               190-448
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 103
               

               Conread position:
               190-449
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 102
               

               Conread position:
               190-449
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               190-452
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               190-452
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 114
               

               Conread position:
               190-456
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 103
               

               Conread position:
               190-456
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               55, 101
               

               Conread position:
               190-456
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               190-456
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               155, 57
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 54
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 25
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               53, 118
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               56, 212
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               190-472
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 221
               

               Conread position:
               190-472
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               52, 212
               

               Conread position:
               190-478
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               102, 57
               

               Conread position:
               190-479
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               58, 115
               

               Conread position:
               190-480
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               45, 102
               

               Conread position:
               190-480
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               176, 41
               

               Conread position:
               190-480
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               190-480
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 287
               

               Conread position:
               190-480
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               54, 128
               

               Conread position:
               203-455
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               30, 91
               

               Conread position:
               203-456
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 203
               

               Conread position:
               203-470
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               44, 105
               

               Conread position:
               204-437
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               204-461
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               204-480
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 136
               

               Conread position:
               206-449
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               209-456
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               209-469
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               210-424
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 137
               

               Conread position:
               210-441
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               212-456
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               29, 81
               

               Conread position:
               212-472
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               213-437
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               213-473
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               214-455
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               214-480
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               216-473
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 91
               

               Conread position:
               217-449
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               229-456
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 106
               

               Conread position:
               234-456
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               236-456
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               238-456
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               53, 66
               

               Conread position:
               240-479
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               244-470
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               244-472
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               58, 46
               

               Conread position:
               244-480
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 46
               

               Conread position:
               246-472
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               301-473
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               45, 103
               
Show alignments to all cow chromosomes.