Cow genome map
| Conread name: | Ss1.1-rcbl0_019726.5 |
| Conread position: | 158-479 |
| Cow position: | chr14:29965175-29964851 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 171-447 |
| Cow position: | chr14:1646046-1646319 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 172-410 |
| Cow position: | chr14:37131800-37131559 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 134 |
| Conread position: | 172-473 |
| Cow position: | chr14:22989179-22988875 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 17, 134 |
| Conread position: | 182-461 |
| Cow position: | chr14:26628389-26628675 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 184-452 |
| Cow position: | chr14:20110586-20110861 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 186-472 |
| Cow position: | chr14:20640497-20640788 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 187-472 |
| Cow position: | chr14:48838722-48838432 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 6, 18 |
| Conread position: | 189-452 |
| Cow position: | chr14:25903651-25903392 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 47 |
| Conread position: | 189-456 |
| Cow position: | chr14:26433114-26433393 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 103 |
| Conread position: | 189-469 |
| Cow position: | chr14:16524604-16524312 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 105 |
| Conread position: | 189-480 |
| Cow position: | chr14:4877106-4877395 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 105, 60 |
| Conread position: | 189-480 |
| Cow position: | chr14:12072824-12073123 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 190-368 |
| Cow position: | chr14:19372466-19372286 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 190-456 |
| Cow position: | chr14:48427198-48426928 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 190-471 |
| Cow position: | chr14:33791311-33791034 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 116, 45 |
| Conread position: | 190-472 |
| Cow position: | chr14:13042881-13042600 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 190-478 |
| Cow position: | chr14:10078394-10078089 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 190-480 |
| Cow position: | chr14:24608091-24607797 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 192-471 |
| Cow position: | chr14:41749638-41749914 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 104, 36 |
| Conread position: | 198-456 |
| Cow position: | chr14:42154847-42155111 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 206-431 |
| Cow position: | chr14:24945380-24945616 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 206-480 |
| Cow position: | chr14:25225840-25225564 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 209-456 |
| Cow position: | chr14:12081032-12081270 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 210-343 |
| Cow position: | chr14:24796327-24796461 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 210-456 |
| Cow position: | chr14:41210960-41210720 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 80 |
| Conread position: | 210-480 |
| Cow position: | chr14:18345625-18345892 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 212-480 |
| Cow position: | chr14:26655032-26655303 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 232-470 |
| Cow position: | chr14:10937762-10937513 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 129 |
| Conread position: | 235-471 |
| Cow position: | chr14:13731018-13731255 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 55 |
| Conread position: | 236-442 |
| Cow position: | chr14:13846064-13845859 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 131, 164 |
| Conread position: | 238-475 |
| Cow position: | chr14:20826565-20826325 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 239-480 |
| Cow position: | chr14:29734288-29734528 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 131, 163 |
| Conread position: | 240-457 |
| Cow position: | chr14:43868384-43868161 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 243-480 |
| Cow position: | chr14:18941214-18941455 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 46 |
Show alignments to all cow chromosomes.