Cow genome map

Conread name: Ss1.1-rcbl0_019726.5

Conread position: 169-472
Cow position: chr2:994471-994170 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 85

Conread position: 172-450
Cow position: chr2:44007317-44007609 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 83

Conread position: 172-456
Cow position: chr2:19328443-19328718 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 172

Conread position: 172-472
Cow position: chr2:7533869-7533579 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 95

Conread position: 172-478
Cow position: chr2:45575096-45574802 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 207, 70

Conread position: 172-480
Cow position: chr2:18997623-18997926 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 66

Conread position: 172-480
Cow position: chr2:33554272-33553968 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 61, 120

Conread position: 173-456
Cow position: chr2:59819904-59819625 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 197, 15

Conread position: 174-474
Cow position: chr2:992053-992361 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 117

Conread position: 175-478
Cow position: chr2:45619496-45619191 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 66, 130

Conread position: 176-431
Cow position: chr2:43790003-43790262 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 64, 170

Conread position: 176-455
Cow position: chr2:46052405-46052686 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 22

Conread position: 177-456
Cow position: chr2:38640219-38640505 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 195

Conread position: 177-472
Cow position: chr2:19137988-19137689 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 115

Conread position: 177-478
Cow position: chr2:13672430-13672722 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 175, 21

Conread position: 177-480
Cow position: chr2:41452139-41452443 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 9

Conread position: 180-343
Cow position: chr2:14089701-14089864 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 9

Conread position: 180-459
Cow position: chr2:24393783-24393505 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 98

Conread position: 180-470
Cow position: chr2:41248473-41248765 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 116

Conread position: 181-385
Cow position: chr2:30144625-30144829 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 111

Conread position: 181-470
Cow position: chr2:13684606-13684890 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 187

Conread position: 184-402
Cow position: chr2:44191390-44191613 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 108

Conread position: 184-480
Cow position: chr2:40488722-40489012 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 77

Conread position: 184-480
Cow position: chr2:46343230-46342941 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 185, 55

Conread position: 186-456
Cow position: chr2:54654702-54654427 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 109

Conread position: 186-470
Cow position: chr2:82116002-82116286 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 204

Conread position: 186-471
Cow position: chr2:46033245-46033536 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 108

Conread position: 186-472
Cow position: chr2:80047-79759 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 111

Conread position: 186-473
Cow position: chr2:75600637-75600918 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 13, 53

Conread position: 186-480
Cow position: chr2:60091515-60091227 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 47

Conread position: 187-452
Cow position: chr2:80275377-80275110 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 183, 12

Conread position: 187-455
Cow position: chr2:16839549-16839823 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 12

Conread position: 187-456
Cow position: chr2:60315428-60315165 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 11

Conread position: 187-461
Cow position: chr2:45542479-45542211 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 107, 56

Conread position: 187-480
Cow position: chr2:46058094-46057801 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 7

Conread position: 189-343
Cow position: chr2:58035023-58035178 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 19

Conread position: 189-452
Cow position: chr2:17805850-17805585 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 118

Conread position: 189-456
Cow position: chr2:47065027-47065299 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 105, 58

Conread position: 190-342
Cow position: chr2:46330978-46331133 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 102

Conread position: 190-398
Cow position: chr2:39798157-39798372 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 190-398
Cow position: chr2:45912716-45912510 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 116

Conread position: 190-399
Cow position: chr2:44222740-44222957 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 106

Conread position: 190-402
Cow position: chr2:47015417-47015206 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 102

Conread position: 190-437
Cow position: chr2:45642572-45642320 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 105

Conread position: 190-448
Cow position: chr2:71622131-71621870 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 109

Conread position: 190-452
Cow position: chr2:77157430-77157164 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 115

Conread position: 190-456
Cow position: chr2:11656810-11657076 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 109

Conread position: 190-456
Cow position: chr2:22372034-22371768 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 58

Conread position: 190-456
Cow position: chr2:44051228-44051495 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 101

Conread position: 190-456
Cow position: chr2:46202189-46202454 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 31

Conread position: 190-456
Cow position: chr2:57939598-57939873 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 183
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 98

Conread position: 190-464
Cow position: chr2:69350650-69350374 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 46, 117

Conread position: 190-472
Cow position: chr2:13001720-13001998 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 96, 45

Conread position: 190-472
Cow position: chr2:19494129-19494416 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 103

Conread position: 190-472
Cow position: chr2:40257497-40257215 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 117

Conread position: 190-472
Cow position: chr2:82581013-82580734 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 117

Conread position: 190-478
Cow position: chr2:43994850-43995139 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 117

Conread position: 190-478
Cow position: chr2:46120724-46120433 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 102

Conread position: 190-480
Cow position: chr2:29121799-29122095 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 114

Conread position: 190-480
Cow position: chr2:46189180-46188886 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 46

Conread position: 190-480
Cow position: chr2:58153617-58153915 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 112

Conread position: 190-480
Cow position: chr2:62744089-62743798 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 11

Conread position: 191-450
Cow position: chr2:56828649-56828380 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 99, 149

Conread position: 191-469
Cow position: chr2:39334946-39334675 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 58

Conread position: 191-472
Cow position: chr2:53649941-53650217 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 97

Conread position: 191-480
Cow position: chr2:57733348-57733640 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 174

Conread position: 196-455
Cow position: chr2:63074936-63074678 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 25

Conread position: 198-437
Cow position: chr2:46968265-46968025 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 118

Conread position: 198-459
Cow position: chr2:14634113-14634372 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 45

Conread position: 198-469
Cow position: chr2:971752-972017 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 34

Conread position: 198-469
Cow position: chr2:84480577-84480300 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 148

Conread position: 198-470
Cow position: chr2:17114806-17114542 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 87

Conread position: 198-472
Cow position: chr2:21382927-21382647 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 94

Conread position: 198-472
Cow position: chr2:38965543-38965812 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 95

Conread position: 198-472
Cow position: chr2:50449980-50449708 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 28

Conread position: 203-441
Cow position: chr2:45535395-45535637 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 101

Conread position: 203-452
Cow position: chr2:44170489-44170740 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 55

Conread position: 203-456
Cow position: chr2:17842052-17841804 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 232, 29

Conread position: 203-456
Cow position: chr2:30351775-30351517 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 46

Conread position: 203-456
Cow position: chr2:71437448-71437190 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 102

Conread position: 203-470
Cow position: chr2:45499271-45499003 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 88, 101

Conread position: 203-480
Cow position: chr2:45596911-45597188 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 90

Conread position: 205-343
Cow position: chr2:40466567-40466706 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 98

Conread position: 205-410
Cow position: chr2:17257777-17257978 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 89

Conread position: 209-456
Cow position: chr2:10439773-10440015 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 98

Conread position: 209-472
Cow position: chr2:41381939-41382192 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 82

Conread position: 209-473
Cow position: chr2:41462490-41462222 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 84

Conread position: 210-476
Cow position: chr2:20947306-20947575 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 62

Conread position: 212-470
Cow position: chr2:46161894-46162152 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 81

Conread position: 213-477
Cow position: chr2:44065519-44065771 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 214-388
Cow position: chr2:44217967-44217790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 37

Conread position: 215-478
Cow position: chr2:21410159-21410436 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 20, 92

Conread position: 249-480
Cow position: chr2:40703689-40703459 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 41

Show alignments to all cow chromosomes.