Cow genome map

Conread name: Ss1.1-rcbl0_019726.5

Conread position: 172-398
Cow position: chr22:3317016-3317248 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 131

Conread position: 172-452
Cow position: chr22:864623-864351 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 134

Conread position: 172-456
Cow position: chr22:42635537-42635249 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 186
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 19, 184

Conread position: 172-470
Cow position: chr22:6327873-6327573 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 39

Conread position: 172-472
Cow position: chr22:16095007-16094708 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 21, 13

Conread position: 172-476
Cow position: chr22:31646387-31646686 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 17

Conread position: 172-480
Cow position: chr22:28071451-28071763 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 20, 121

Conread position: 177-480
Cow position: chr22:4061045-4060742 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 190, 81

Conread position: 180-480
Cow position: chr22:7882456-7882761 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 134

Conread position: 181-472
Cow position: chr22:17852730-17852440 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 128

Conread position: 181-480
Cow position: chr22:44740992-44741277 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 189, 52

Conread position: 184-435
Cow position: chr22:17224762-17224507 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 99

Conread position: 184-452
Cow position: chr22:17950062-17949798 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 55

Conread position: 184-472
Cow position: chr22:12981815-12981527 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 57, 108

Conread position: 185-343
Cow position: chr22:26141187-26141342 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 12

Conread position: 186-437
Cow position: chr22:4119656-4119399 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 221

Conread position: 186-437
Cow position: chr22:25743041-25742799 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 25

Conread position: 186-452
Cow position: chr22:19827955-19827682 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 34

Conread position: 186-452
Cow position: chr22:34441727-34441453 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 14

Conread position: 187-421
Cow position: chr22:15039270-15039036 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 138, 11

Conread position: 187-437
Cow position: chr22:1659074-1659336 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 17

Conread position: 188-471
Cow position: chr22:36433061-36432773 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 105

Conread position: 189-403
Cow position: chr22:4017390-4017604 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 59

Conread position: 189-456
Cow position: chr22:41971247-41970974 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 255

Conread position: 189-472
Cow position: chr22:12678507-12678223 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 60

Conread position: 190-368
Cow position: chr22:4011098-4011276 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 40

Conread position: 190-393
Cow position: chr22:8481557-8481763 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 138
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 190-398
Cow position: chr22:34104761-34104546 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 103

Conread position: 190-456
Cow position: chr22:10532423-10532676 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 36

Conread position: 190-456
Cow position: chr22:10631298-10631571 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 99

Conread position: 190-456
Cow position: chr22:37201768-37202031 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 175
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 125, 43

Conread position: 190-456
Cow position: chr22:40048467-40048741 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 104

Conread position: 190-470
Cow position: chr22:30699092-30699361 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 115

Conread position: 190-470
Cow position: chr22:30818119-30818405 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 120

Conread position: 190-472
Cow position: chr22:11613339-11613624 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 46

Conread position: 190-472
Cow position: chr22:38439242-38438960 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 18

Conread position: 190-480
Cow position: chr22:5616222-5616505 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 268, 48

Conread position: 190-480
Cow position: chr22:6215645-6215351 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 50, 122

Conread position: 190-480
Cow position: chr22:6709866-6709584 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 42

Conread position: 190-480
Cow position: chr22:24903503-24903798 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 74

Conread position: 190-480
Cow position: chr22:33448167-33447872 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 59

Conread position: 191-456
Cow position: chr22:12803472-12803205 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 101

Conread position: 191-458
Cow position: chr22:4315542-4315821 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 102

Conread position: 191-472
Cow position: chr22:18021114-18020833 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 101, 49

Conread position: 194-470
Cow position: chr22:6176372-6176086 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 114

Conread position: 196-478
Cow position: chr22:26056950-26056657 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 99

Conread position: 197-455
Cow position: chr22:39508121-39507858 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 206

Conread position: 198-431
Cow position: chr22:9171327-9171565 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 109

Conread position: 198-438
Cow position: chr22:14214441-14214204 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 91, 40

Conread position: 198-445
Cow position: chr22:29290219-29289977 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 67

Conread position: 198-452
Cow position: chr22:28370865-28371110 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 95

Conread position: 198-452
Cow position: chr22:43397935-43398178 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 168, 38

Conread position: 198-456
Cow position: chr22:41898525-41898266 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 167
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 125, 136

Conread position: 198-456
Cow position: chr22:44717634-44717903 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 212

Conread position: 203-455
Cow position: chr22:13957720-13957463 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 29, 102

Conread position: 203-456
Cow position: chr22:17152606-17152871 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 86, 38

Conread position: 203-470
Cow position: chr22:10122304-10122564 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 58

Conread position: 203-473
Cow position: chr22:1983779-1984056 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 33

Conread position: 203-473
Cow position: chr22:9372447-9372725 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 102

Conread position: 204-472
Cow position: chr22:41982791-41982520 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 101

Conread position: 205-472
Cow position: chr22:42617927-42618193 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 87

Conread position: 206-472
Cow position: chr22:12157913-12157651 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 20

Conread position: 209-442
Cow position: chr22:1349756-1350001 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 84

Conread position: 209-452
Cow position: chr22:39215683-39215433 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 81, 38

Conread position: 209-455
Cow position: chr22:16533009-16533254 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 40

Conread position: 209-478
Cow position: chr22:43704929-43704663 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 85, 14

Conread position: 220-455
Cow position: chr22:2101003-2100767 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 71

Conread position: 232-457
Cow position: chr22:12902891-12902672 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 138, 58

Conread position: 235-456
Cow position: chr22:14141383-14141158 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 69

Conread position: 241-467
Cow position: chr22:4163943-4164172 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 61

Conread position: 261-479
Cow position: chr22:16813783-16813999 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 43

Show alignments to all cow chromosomes.