Cow genome map
| Conread name: | Ss1.1-rcbl0_019726.5 |
| Conread position: | 158-398 |
| Cow position: | chr26:8700143-8699906 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 172-475 |
| Cow position: | chr26:8307608-8307311 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 176-456 |
| Cow position: | chr26:26888215-26887935 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 128 |
| Conread position: | 176-470 |
| Cow position: | chr26:19446043-19446355 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 138 |
| Conread position: | 180-456 |
| Cow position: | chr26:13802036-13802311 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 69 |
| Conread position: | 181-473 |
| Cow position: | chr26:9535440-9535732 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 184-452 |
| Cow position: | chr26:34724953-34724676 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 116 |
| Conread position: | 184-456 |
| Cow position: | chr26:35704312-35704576 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 185-431 |
| Cow position: | chr26:33736625-33736378 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 189-472 |
| Cow position: | chr26:647793-647505 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 189-473 |
| Cow position: | chr26:12145187-12144898 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 189-474 |
| Cow position: | chr26:7687307-7687018 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 45 |
| Conread position: | 190-410 |
| Cow position: | chr26:678045-677822 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 190-452 |
| Cow position: | chr26:27491567-27491297 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 190-456 |
| Cow position: | chr26:14481619-14481364 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 190-472 |
| Cow position: | chr26:12964762-12964464 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 191-449 |
| Cow position: | chr26:24240611-24240879 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 115 |
| Conread position: | 192-455 |
| Cow position: | chr26:19591419-19591680 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 198-410 |
| Cow position: | chr26:13021203-13020987 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 104 |
| Conread position: | 198-456 |
| Cow position: | chr26:28251092-28251356 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 229 |
| Conread position: | 198-472 |
| Cow position: | chr26:23924789-23925061 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 109 |
| Conread position: | 199-398 |
| Cow position: | chr26:14175224-14175427 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 92 |
| Conread position: | 203-398 |
| Cow position: | chr26:21637093-21636895 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 104 |
| Conread position: | 203-452 |
| Cow position: | chr26:22892500-22892249 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 203-470 |
| Cow position: | chr26:33202122-33201855 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 204-456 |
| Cow position: | chr26:28423234-28423488 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 89 |
| Conread position: | 210-470 |
| Cow position: | chr26:20291738-20291477 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 212-469 |
| Cow position: | chr26:5836864-5836603 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 229-472 |
| Cow position: | chr26:34611208-34610969 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 141, 161 |
| Conread position: | 232-472 |
| Cow position: | chr26:7314598-7314846 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 138, 234 |
Show alignments to all cow chromosomes.