Cow genome map

Conread name: Ss1.1-rcbl0_019726.5

Conread position: 172-455
Cow position: chr3:70609500-70609786 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 125

Conread position: 172-456
Cow position: chr3:76922789-76922511 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 93

Conread position: 172-470
Cow position: chr3:23408478-23408189 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 67

Conread position: 172-472
Cow position: chr3:78077067-78077367 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 167, 13

Conread position: 172-480
Cow position: chr3:55177877-55177568 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 138

Conread position: 173-449
Cow position: chr3:53150203-53150488 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 64

Conread position: 174-456
Cow position: chr3:75479878-75480160 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 142

Conread position: 175-471
Cow position: chr3:17456388-17456091 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 99, 14

Conread position: 175-480
Cow position: chr3:75080646-75080937 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 24, 14

Conread position: 175-480
Cow position: chr3:82019965-82019656 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 202
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 119

Conread position: 177-456
Cow position: chr3:17331607-17331881 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 108

Conread position: 177-473
Cow position: chr3:2393082-2392791 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 71

Conread position: 177-480
Cow position: chr3:70762242-70761936 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 84

Conread position: 180-398
Cow position: chr3:70899777-70899995 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 64

Conread position: 180-415
Cow position: chr3:73460847-73461086 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 64, 156

Conread position: 180-480
Cow position: chr3:60264834-60264535 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 125

Conread position: 181-449
Cow position: chr3:68627802-68627532 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 83

Conread position: 181-470
Cow position: chr3:48362963-48363244 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 189, 22

Conread position: 184-468
Cow position: chr3:49363002-49363280 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 17

Conread position: 184-470
Cow position: chr3:59604732-59605017 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 107

Conread position: 184-475
Cow position: chr3:52608069-52608361 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 24

Conread position: 186-455
Cow position: chr3:10958354-10958083 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 162

Conread position: 186-471
Cow position: chr3:55819639-55819925 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 124

Conread position: 186-471
Cow position: chr3:69785737-69785444 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 105

Conread position: 186-472
Cow position: chr3:12705657-12705370 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 107

Conread position: 187-393
Cow position: chr3:73237086-73237292 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 10

Conread position: 188-456
Cow position: chr3:78092621-78092349 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 11

Conread position: 189-430
Cow position: chr3:32409104-32409356 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 9

Conread position: 189-455
Cow position: chr3:18607557-18607824 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 10

Conread position: 189-456
Cow position: chr3:74533241-74533496 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 59

Conread position: 189-457
Cow position: chr3:59610828-59610556 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 32

Conread position: 189-471
Cow position: chr3:15951019-15950741 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 54

Conread position: 190-365
Cow position: chr3:80072020-80072197 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 116

Conread position: 190-391
Cow position: chr3:55272153-55271947 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 115

Conread position: 190-430
Cow position: chr3:80564857-80565100 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 76

Conread position: 190-441
Cow position: chr3:54946022-54946271 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 106

Conread position: 190-449
Cow position: chr3:39969974-39969708 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 104

Conread position: 190-452
Cow position: chr3:15052058-15051794 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 117

Conread position: 190-452
Cow position: chr3:53221908-53222170 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 112, 22

Conread position: 190-452
Cow position: chr3:74079745-74079480 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 102

Conread position: 190-456
Cow position: chr3:68708110-68707860 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 190-456
Cow position: chr3:78093490-78093231 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 58

Conread position: 190-469
Cow position: chr3:49327835-49328108 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 114

Conread position: 190-470
Cow position: chr3:27274423-27274702 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 101

Conread position: 190-470
Cow position: chr3:54373965-54373682 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 160, 45

Conread position: 190-470
Cow position: chr3:68881218-68880956 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 190-471
Cow position: chr3:79196653-79196939 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 19

Conread position: 190-476
Cow position: chr3:55189863-55189569 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 52, 275

Conread position: 190-478
Cow position: chr3:15443836-15443543 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 101

Conread position: 190-478
Cow position: chr3:53790643-53790359 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 74

Conread position: 190-478
Cow position: chr3:54506597-54506889 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 52, 103

Conread position: 190-480
Cow position: chr3:2674922-2675214 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 99

Conread position: 190-480
Cow position: chr3:9641459-9641741 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 64, 113

Conread position: 190-480
Cow position: chr3:83474633-83474939 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 283

Conread position: 191-396
Cow position: chr3:56059702-56059914 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 102

Conread position: 191-470
Cow position: chr3:17936946-17936672 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 34

Conread position: 191-471
Cow position: chr3:22165523-22165239 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 45

Conread position: 191-478
Cow position: chr3:3316918-3316624 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 103, 55

Conread position: 198-424
Cow position: chr3:19626608-19626377 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 109

Conread position: 198-429
Cow position: chr3:70565836-70565599 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 44

Conread position: 198-469
Cow position: chr3:44932414-44932687 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 110

Conread position: 198-475
Cow position: chr3:44625262-44624994 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 93

Conread position: 198-480
Cow position: chr3:50768584-50768865 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 173, 39

Conread position: 199-455
Cow position: chr3:75608399-75608649 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 47, 100

Conread position: 203-404
Cow position: chr3:59799154-59799347 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 87

Conread position: 203-480
Cow position: chr3:23169160-23168883 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 82

Conread position: 204-472
Cow position: chr3:64281024-64280761 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 185

Conread position: 207-473
Cow position: chr3:59299486-59299753 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 40

Conread position: 207-480
Cow position: chr3:9663261-9662984 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 35

Conread position: 209-452
Cow position: chr3:31350193-31349950 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 81

Conread position: 209-470
Cow position: chr3:71474496-71474232 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 81

Conread position: 209-478
Cow position: chr3:7337871-7337603 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 97

Conread position: 210-452
Cow position: chr3:11987242-11987486 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 25

Conread position: 210-471
Cow position: chr3:61224833-61224574 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 5

Conread position: 210-478
Cow position: chr3:19682605-19682890 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 97

Conread position: 212-461
Cow position: chr3:64196739-64196991 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 249

Conread position: 214-449
Cow position: chr3:10668962-10668724 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 76

Conread position: 216-470
Cow position: chr3:76269816-76270063 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 167, 27

Conread position: 222-472
Cow position: chr3:45700732-45700979 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 249-471
Cow position: chr3:23132217-23131992 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 41

Conread position: 266-478
Cow position: chr3:52845520-52845739 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 141

Show alignments to all cow chromosomes.