Cow genome map
| Conread name: | Ss1.1-rcbl0_021057.5 |
| Conread position: | 1-158 |
| Cow position: | chr15:28608070-28607915 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 2-168 |
| Cow position: | chr15:52131939-52132105 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 82, 134 |
| Conread position: | 2-169 |
| Cow position: | chr15:6523343-6523180 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 71 |
| Conread position: | 2-174 |
| Cow position: | chr15:40065989-40066158 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 125 |
| Conread position: | 2-178 |
| Cow position: | chr15:30570240-30570411 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 134 |
| Conread position: | 2-196 |
| Cow position: | chr15:16669321-16669134 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 2-234 |
| Cow position: | chr15:582944-583178 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 81, 24 |
| Conread position: | 3-169 |
| Cow position: | chr15:16989594-16989757 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 3-170 |
| Cow position: | chr15:37633466-37633632 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 83, 53 |
| Conread position: | 3-172 |
| Cow position: | chr15:9427921-9427739 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 3-172 |
| Cow position: | chr15:11287285-11287119 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 78, 132 |
| Conread position: | 4-156 |
| Cow position: | chr15:7443824-7443674 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 4-166 |
| Cow position: | chr15:13081422-13081584 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 4-169 |
| Cow position: | chr15:5912283-5912119 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 82, 132 |
| Conread position: | 4-169 |
| Cow position: | chr15:41807438-41807275 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 79, 63 |
| Conread position: | 4-172 |
| Cow position: | chr15:17642300-17642463 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 79, 119 |
| Conread position: | 4-172 |
| Cow position: | chr15:23265879-23266044 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 4-172 |
| Cow position: | chr15:53728177-53728009 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 78, 120 |
| Conread position: | 4-206 |
| Cow position: | chr15:53712940-53713135 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 5-163 |
| Cow position: | chr15:44797161-44797006 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 5-170 |
| Cow position: | chr15:4622669-4622509 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 5-172 |
| Cow position: | chr15:52868922-52869086 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 27 |
| Conread position: | 5-175 |
| Cow position: | chr15:25683800-25683971 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 6-131 |
| Cow position: | chr15:11997860-11997987 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 6-171 |
| Cow position: | chr15:39809609-39809774 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 74, 129 |
| Conread position: | 7-179 |
| Cow position: | chr15:36278089-36277919 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 76, 116 |
| Conread position: | 8-172 |
| Cow position: | chr15:8630445-8630600 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-172 |
| Cow position: | chr15:21802645-21802809 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 128 |
| Conread position: | 8-172 |
| Cow position: | chr15:35067037-35067201 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 128 |
| Conread position: | 9-158 |
| Cow position: | chr15:9075430-9075576 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 9-170 |
| Cow position: | chr15:9437604-9437762 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 93, 64 |
| Conread position: | 10-164 |
| Cow position: | chr15:16972040-16971886 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 74, 121 |
| Conread position: | 11-163 |
| Cow position: | chr15:49272038-49272191 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 126 |
| Conread position: | 12-132 |
| Cow position: | chr15:12283273-12283396 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 17-189 |
| Cow position: | chr15:1992771-1992946 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 119 |
| Conread position: | 23-168 |
| Cow position: | chr15:37491608-37491470 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.