Cow genome map

Conread name: Ss1.1-rcbl0_021057.5

Conread position: 1-172
Cow position: chr16:2722615-2722444 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 135

Conread position: 2-158
Cow position: chr16:31374479-31374320 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 135

Conread position: 2-163
Cow position: chr16:43850399-43850238 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 81, 134

Conread position: 2-169
Cow position: chr16:3742697-3742530 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 135

Conread position: 2-171
Cow position: chr16:47781731-47781901 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 137

Conread position: 2-172
Cow position: chr16:30109396-30109235 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 2-177
Cow position: chr16:12243119-12242948 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 29

Conread position: 2-178
Cow position: chr16:23034866-23034693 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 95, 83

Conread position: 2-192
Cow position: chr16:30572195-30572005 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 119

Conread position: 3-127
Cow position: chr16:14423334-14423460 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 3-169
Cow position: chr16:48894395-48894229 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 80, 133

Conread position: 4-161
Cow position: chr16:23301764-23301921 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 130

Conread position: 4-171
Cow position: chr16:14799305-14799142 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 4-171
Cow position: chr16:32352547-32352713 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 94

Conread position: 5-131
Cow position: chr16:45057845-45057974 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 5-177
Cow position: chr16:14084718-14084546 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 78, 131

Conread position: 6-162
Cow position: chr16:4295095-4294941 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 101

Conread position: 6-166
Cow position: chr16:15509365-15509525 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 77, 57

Conread position: 6-175
Cow position: chr16:24038531-24038699 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 130

Conread position: 6-178
Cow position: chr16:56373445-56373281 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 52

Conread position: 7-176
Cow position: chr16:52650084-52649917 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 42

Conread position: 8-169
Cow position: chr16:41680326-41680166 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 129

Conread position: 8-172
Cow position: chr16:14444612-14444772 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 33

Conread position: 8-174
Cow position: chr16:13044281-13044447 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 129

Conread position: 8-174
Cow position: chr16:43850085-43849920 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 128

Conread position: 8-175
Cow position: chr16:16118893-16119062 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 130

Conread position: 9-168
Cow position: chr16:22785608-22785449 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 126

Conread position: 10-155
Cow position: chr16:37508520-37508663 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 13-179
Cow position: chr16:5131338-5131165 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 159

Conread position: 13-225
Cow position: chr16:26106593-26106808 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 30

Conread position: 20-172
Cow position: chr16:37024803-37024655 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 24-132
Cow position: chr16:38397886-38397777 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 24-170
Cow position: chr16:10198441-10198588 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 26, 113

Conread position: 50-172
Cow position: chr16:14824504-14824383 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 85

Show alignments to all cow chromosomes.