Cow genome map
| Conread name: | Ss1.1-rcbl0_021057.5 |
| Conread position: | 2-124 |
| Cow position: | chr17:6980267-6980143 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 2-162 |
| Cow position: | chr17:15450969-15451120 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 105, 84 |
| Conread position: | 2-163 |
| Cow position: | chr17:10261586-10261740 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 2-171 |
| Cow position: | chr17:12842742-12842903 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 2-171 |
| Cow position: | chr17:18417770-18417597 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 58, 90 |
| Conread position: | 2-171 |
| Cow position: | chr17:34319664-34319497 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 134 |
| Conread position: | 2-173 |
| Cow position: | chr17:33271309-33271141 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 3-163 |
| Cow position: | chr17:32451184-32451024 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 80, 133 |
| Conread position: | 3-177 |
| Cow position: | chr17:13235982-13236158 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 133 |
| Conread position: | 3-197 |
| Cow position: | chr17:43143322-43143126 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 128, 179 |
| Conread position: | 4-162 |
| Cow position: | chr17:26481295-26481451 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 80, 131 |
| Conread position: | 4-174 |
| Cow position: | chr17:19789405-19789236 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 33 |
| Conread position: | 4-177 |
| Cow position: | chr17:4625235-4625403 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 68 |
| Conread position: | 5-169 |
| Cow position: | chr17:2736189-2736351 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 78, 87 |
| Conread position: | 5-170 |
| Cow position: | chr17:404330-404502 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 79, 138 |
| Conread position: | 5-172 |
| Cow position: | chr17:28847173-28847007 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 5-173 |
| Cow position: | chr17:7211085-7211253 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 5-173 |
| Cow position: | chr17:19447313-19447149 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 6-125 |
| Cow position: | chr17:13703768-13703889 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 6-165 |
| Cow position: | chr17:11225656-11225816 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 129 |
| Conread position: | 7-168 |
| Cow position: | chr17:3223826-3223983 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 123 |
| Conread position: | 9-163 |
| Cow position: | chr17:17500886-17500736 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 18-170 |
| Cow position: | chr17:14780028-14780179 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 65, 119 |
| Conread position: | 20-168 |
| Cow position: | chr17:25117561-25117709 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 116 |
| Conread position: | 22-176 |
| Cow position: | chr17:37722662-37722508 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 114 |
| Conread position: | 22-181 |
| Cow position: | chr17:41899117-41898955 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.