Cow genome map
| Conread name: | Ss1.1-rcbl0_021057.5 |
| Conread position: | 2-120 |
| Cow position: | chr18:5060137-5060017 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 2-158 |
| Cow position: | chr18:36456439-36456592 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 2-175 |
| Cow position: | chr18:1195877-1196040 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 2-177 |
| Cow position: | chr18:28085976-28086150 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 86, 132 |
| Conread position: | 2-179 |
| Cow position: | chr18:19213464-19213290 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 120 |
| Conread position: | 3-120 |
| Cow position: | chr18:51331994-51332111 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 28 |
| Conread position: | 3-168 |
| Cow position: | chr18:1700981-1701146 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 80, 133 |
| Conread position: | 3-169 |
| Cow position: | chr18:50880883-50881052 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 80, 144 |
| Conread position: | 3-170 |
| Cow position: | chr18:49436750-49436917 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 80, 133 |
| Conread position: | 4-169 |
| Cow position: | chr18:32861050-32861215 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 80, 132 |
| Conread position: | 4-171 |
| Cow position: | chr18:1129299-1129461 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 4-177 |
| Cow position: | chr18:16259665-16259838 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 6-162 |
| Cow position: | chr18:26866237-26866391 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 72, 107 |
| Conread position: | 6-171 |
| Cow position: | chr18:21123122-21122964 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 7-132 |
| Cow position: | chr18:53047650-53047525 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 102 |
| Conread position: | 7-172 |
| Cow position: | chr18:52871011-52871176 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 128 |
| Conread position: | 9-163 |
| Cow position: | chr18:27405290-27405443 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 90 |
| Conread position: | 9-169 |
| Cow position: | chr18:39474862-39474702 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 127 |
| Conread position: | 10-172 |
| Cow position: | chr18:1740715-1740554 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 126 |
| Conread position: | 10-172 |
| Cow position: | chr18:25846629-25846470 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 12-178 |
| Cow position: | chr18:24664040-24663875 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 124 |
| Conread position: | 13-120 |
| Cow position: | chr18:26667690-26667796 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 17-172 |
| Cow position: | chr18:32371708-32371556 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 117 |
| Conread position: | 32-170 |
| Cow position: | chr18:35471135-35470999 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 52, 104 |
| Conread position: | 32-172 |
| Cow position: | chr18:32286651-32286788 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.