Cow genome map
| Conread name: | Ss1.1-rcbl0_021057.5 |
| Conread position: | 1-159 |
| Cow position: | chr2:9709897-9710052 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 2-163 |
| Cow position: | chr2:19750766-19750923 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 81, 66 |
| Conread position: | 2-164 |
| Cow position: | chr2:41491075-41491235 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 82, 121 |
| Conread position: | 2-169 |
| Cow position: | chr2:53280812-53280980 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 136 |
| Conread position: | 2-170 |
| Cow position: | chr2:18274232-18274066 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 81, 134 |
| Conread position: | 2-171 |
| Cow position: | chr2:74387693-74387526 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 3-132 |
| Cow position: | chr2:49441267-49441397 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 43 |
| Conread position: | 3-136 |
| Cow position: | chr2:3730545-3730675 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 3-143 |
| Cow position: | chr2:44983234-44983091 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 3-168 |
| Cow position: | chr2:52183387-52183545 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 3-192 |
| Cow position: | chr2:20534196-20534007 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 132 |
| Conread position: | 4-108 |
| Cow position: | chr2:38583484-38583378 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 4-131 |
| Cow position: | chr2:73204998-73204869 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 5-171 |
| Cow position: | chr2:16522036-16522201 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 5-172 |
| Cow position: | chr2:41417795-41417625 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 103 |
| Conread position: | 5-173 |
| Cow position: | chr2:12910624-12910792 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 5-173 |
| Cow position: | chr2:62463557-62463389 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 79, 134 |
| Conread position: | 5-189 |
| Cow position: | chr2:3544171-3543983 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 138 |
| Conread position: | 6-173 |
| Cow position: | chr2:33791043-33790879 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 75, 59 |
| Conread position: | 6-179 |
| Cow position: | chr2:38805915-38805743 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 130 |
| Conread position: | 6-181 |
| Cow position: | chr2:13685034-13685199 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 50 |
| Conread position: | 7-165 |
| Cow position: | chr2:40370334-40370184 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 7-171 |
| Cow position: | chr2:13048644-13048808 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 75, 129 |
| Conread position: | 7-174 |
| Cow position: | chr2:56822894-56822729 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 78, 74 |
| Conread position: | 7-189 |
| Cow position: | chr2:72599253-72599434 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 76, 129 |
| Conread position: | 8-168 |
| Cow position: | chr2:31420433-31420599 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 8-172 |
| Cow position: | chr2:68962665-68962508 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 9-171 |
| Cow position: | chr2:51826730-51826573 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 10-162 |
| Cow position: | chr2:82827939-82827787 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 73, 129 |
| Conread position: | 10-169 |
| Cow position: | chr2:23062480-23062323 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 11-171 |
| Cow position: | chr2:59592564-59592404 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 125 |
| Conread position: | 11-172 |
| Cow position: | chr2:14037278-14037122 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 76, 115 |
| Conread position: | 13-171 |
| Cow position: | chr2:25112578-25112733 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 14-176 |
| Cow position: | chr2:21697277-21697121 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 16-178 |
| Cow position: | chr2:12777131-12776969 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 67, 121 |
| Conread position: | 17-186 |
| Cow position: | chr2:36213904-36213739 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 104 |
| Conread position: | 24-172 |
| Cow position: | chr2:71121693-71121841 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 112 |
| Conread position: | 35-185 |
| Cow position: | chr2:37155541-37155394 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 67 |
Show alignments to all cow chromosomes.