Cow genome map
| Conread name: | Ss1.1-rcbl0_021057.5 |
| Conread position: | 2-129 |
| Cow position: | chr20:7284333-7284459 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 82, 98 |
| Conread position: | 2-162 |
| Cow position: | chr20:15147519-15147359 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 134 |
| Conread position: | 2-171 |
| Cow position: | chr20:23400763-23400918 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-207 |
| Cow position: | chr20:36988117-36987918 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 57 |
| Conread position: | 3-172 |
| Cow position: | chr20:5668299-5668131 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 4-174 |
| Cow position: | chr20:13588674-13588507 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 4-185 |
| Cow position: | chr20:33154502-33154322 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 5-156 |
| Cow position: | chr20:21300985-21300837 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 5-159 |
| Cow position: | chr20:3376827-3376673 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 5-168 |
| Cow position: | chr20:887406-887568 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 117 |
| Conread position: | 7-170 |
| Cow position: | chr20:14864386-14864226 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 7-171 |
| Cow position: | chr20:20350314-20350150 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 129 |
| Conread position: | 7-192 |
| Cow position: | chr20:30285846-30286025 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 104 |
| Conread position: | 8-235 |
| Cow position: | chr20:17473109-17472880 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 9-127 |
| Cow position: | chr20:13790478-13790599 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 9-132 |
| Cow position: | chr20:31098194-31098315 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 9-172 |
| Cow position: | chr20:2858826-2858984 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 10-220 |
| Cow position: | chr20:30243693-30243897 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 172, 46 |
| Conread position: | 13-172 |
| Cow position: | chr20:7801646-7801489 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 13-177 |
| Cow position: | chr20:12118526-12118360 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 129 |
| Conread position: | 15-219 |
| Cow position: | chr20:16582797-16582593 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 116 |
| Conread position: | 24-169 |
| Cow position: | chr20:4851792-4851935 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 50 |
| Conread position: | 29-177 |
| Cow position: | chr20:27976966-27976820 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 60 |
Show alignments to all cow chromosomes.