Cow genome map
| Conread name: | Ss1.1-rcbl0_021057.5 |
| Conread position: | 1-127 |
| Cow position: | chr21:33975135-33975266 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-170 |
| Cow position: | chr21:26631968-26631801 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 30 |
| Conread position: | 2-171 |
| Cow position: | chr21:30567469-30567309 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-174 |
| Cow position: | chr21:45962895-45963065 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 29 |
| Conread position: | 4-162 |
| Cow position: | chr21:22941871-22942028 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 134 |
| Conread position: | 4-172 |
| Cow position: | chr21:39074983-39074820 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 45 |
| Conread position: | 4-175 |
| Cow position: | chr21:37170262-37170429 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 4-176 |
| Cow position: | chr21:15543452-15543288 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 79, 117 |
| Conread position: | 5-162 |
| Cow position: | chr21:27089457-27089300 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 76, 132 |
| Conread position: | 5-169 |
| Cow position: | chr21:27678510-27678674 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 5-170 |
| Cow position: | chr21:12079709-12079873 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 5-172 |
| Cow position: | chr21:28650842-28651005 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 5-178 |
| Cow position: | chr21:6282420-6282588 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 82, 54 |
| Conread position: | 7-156 |
| Cow position: | chr21:23286148-23285999 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 129 |
| Conread position: | 10-171 |
| Cow position: | chr21:45448086-45448246 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 10-173 |
| Cow position: | chr21:45286274-45286115 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 13-172 |
| Cow position: | chr21:17671877-17671721 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 14-179 |
| Cow position: | chr21:26742020-26741857 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 20-162 |
| Cow position: | chr21:24972116-24971974 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 63, 116 |
| Conread position: | 22-158 |
| Cow position: | chr21:5487047-5487183 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 29-184 |
| Cow position: | chr21:25019518-25019672 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 34-167 |
| Cow position: | chr21:5588907-5588776 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 40-188 |
| Cow position: | chr21:29943436-29943584 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 95 |
Show alignments to all cow chromosomes.