Cow genome map
| Conread name: | Ss1.1-rcbl0_021057.5 |
| Conread position: | 1-162 |
| Cow position: | chr27:9261343-9261182 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 136 |
| Conread position: | 2-106 |
| Cow position: | chr27:11935217-11935110 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-174 |
| Cow position: | chr27:4921931-4922102 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 3-156 |
| Cow position: | chr27:12547844-12548000 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 131 |
| Conread position: | 3-163 |
| Cow position: | chr27:15211279-15211113 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 3-188 |
| Cow position: | chr27:18573419-18573233 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 120 |
| Conread position: | 4-168 |
| Cow position: | chr27:18057022-18056862 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 53 |
| Conread position: | 4-169 |
| Cow position: | chr27:3935182-3935351 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 4-180 |
| Cow position: | chr27:12000144-12000320 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 4-185 |
| Cow position: | chr27:11021285-11021114 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 5-169 |
| Cow position: | chr27:18179155-18179317 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 54 |
| Conread position: | 7-170 |
| Cow position: | chr27:17564553-17564389 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 124 |
| Conread position: | 8-175 |
| Cow position: | chr27:13861061-13861218 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 9-117 |
| Cow position: | chr27:1540744-1540852 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 74, 47 |
| Conread position: | 11-170 |
| Cow position: | chr27:2246518-2246360 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 22 |
| Conread position: | 12-172 |
| Cow position: | chr27:18546439-18546283 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 14-162 |
| Cow position: | chr27:31238470-31238618 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 125 |
Show alignments to all cow chromosomes.