Cow genome map

Conread name: Ss1.1-rcbl0_021057.5

Conread position: 1-172
Cow position: chr4:9128163-9128337 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 83

Conread position: 2-168
Cow position: chr4:22891679-22891516 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 25

Conread position: 2-172
Cow position: chr4:4519568-4519738 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 86, 134

Conread position: 2-172
Cow position: chr4:34043182-34043012 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 80, 121

Conread position: 2-186
Cow position: chr4:57221797-57221613 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 134

Conread position: 3-118
Cow position: chr4:4192621-4192734 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 56

Conread position: 3-170
Cow position: chr4:31002935-31002768 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 128

Conread position: 3-171
Cow position: chr4:2443472-2443308 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 3-172
Cow position: chr4:49741985-49742149 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 51

Conread position: 4-175
Cow position: chr4:57565796-57565632 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 63

Conread position: 4-177
Cow position: chr4:5188586-5188414 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 79, 66

Conread position: 5-158
Cow position: chr4:52597129-52596973 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 134

Conread position: 5-181
Cow position: chr4:36759706-36759883 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 67, 133

Conread position: 6-162
Cow position: chr4:25924538-25924382 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 55

Conread position: 6-169
Cow position: chr4:57652634-57652803 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 7-120
Cow position: chr4:9089654-9089539 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 7-171
Cow position: chr4:53641738-53641900 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 7-175
Cow position: chr4:22506955-22506794 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 8-178
Cow position: chr4:58432540-58432368 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 131

Conread position: 10-132
Cow position: chr4:4029258-4029382 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 10-177
Cow position: chr4:45401077-45401242 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 22

Conread position: 12-183
Cow position: chr4:5784145-5784315 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 55

Conread position: 13-178
Cow position: chr4:5886765-5886930 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 74, 123

Conread position: 14-156
Cow position: chr4:6793918-6794058 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 13

Conread position: 17-172
Cow position: chr4:31586171-31586016 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 66, 119

Conread position: 23-177
Cow position: chr4:60662835-60662989 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 113

Show alignments to all cow chromosomes.