Cow genome map
| Conread name: | Ss1.1-rcbl0_021057.5 |
| Conread position: | 2-162 |
| Cow position: | chr7:54060361-54060202 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 2-169 |
| Cow position: | chr7:40643468-40643632 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 2-171 |
| Cow position: | chr7:12920175-12920011 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 2-171 |
| Cow position: | chr7:40622651-40622814 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 3-120 |
| Cow position: | chr7:5701395-5701514 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 3-120 |
| Cow position: | chr7:30027611-30027731 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 3-127 |
| Cow position: | chr7:42221948-42221826 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 3-171 |
| Cow position: | chr7:59204754-59204922 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 133 |
| Conread position: | 3-173 |
| Cow position: | chr7:61426047-61426213 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 3-178 |
| Cow position: | chr7:68366771-68366594 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 4-172 |
| Cow position: | chr7:62048882-62049049 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 4-221 |
| Cow position: | chr7:43257664-43257880 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 79, 133 |
| Conread position: | 5-172 |
| Cow position: | chr7:43004859-43005024 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 84, 106 |
| Conread position: | 5-194 |
| Cow position: | chr7:8893574-8893387 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 6-168 |
| Cow position: | chr7:46216521-46216683 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 133 |
| Conread position: | 7-157 |
| Cow position: | chr7:59844927-59845077 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 129 |
| Conread position: | 8-121 |
| Cow position: | chr7:48335023-48334909 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 8-156 |
| Cow position: | chr7:56664534-56664675 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 8-171 |
| Cow position: | chr7:11592752-11592593 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 157, 110 |
| Conread position: | 8-171 |
| Cow position: | chr7:20288781-20288624 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 9-172 |
| Cow position: | chr7:32589290-32589450 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 21-172 |
| Cow position: | chr7:65519625-65519474 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 114 |
| Conread position: | 22-132 |
| Cow position: | chr7:53356219-53356108 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 31-171 |
| Cow position: | chr7:58545936-58545800 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 104 |
| Conread position: | 37-161 |
| Cow position: | chr7:24883510-24883386 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 98 |
Show alignments to all cow chromosomes.