Cow genome map

Conread name: Ss1.1-rcbl0_021057.5

Conread position: 2-127
Cow position: chr9:59114041-59113914 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 2-131
Cow position: chr9:12183319-12183190 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 81, 110

Conread position: 2-162
Cow position: chr9:15855443-15855599 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 30

Conread position: 2-205
Cow position: chr9:34763260-34763460 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 134

Conread position: 3-120
Cow position: chr9:12199314-12199433 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 3-132
Cow position: chr9:45140485-45140356 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 121

Conread position: 3-162
Cow position: chr9:9539171-9539010 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 153

Conread position: 3-171
Cow position: chr9:22376854-22376690 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 4-119
Cow position: chr9:4985773-4985889 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 30

Conread position: 4-162
Cow position: chr9:62721244-62721403 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 133

Conread position: 4-171
Cow position: chr9:40923058-40923224 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 131

Conread position: 4-175
Cow position: chr9:1527206-1527376 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 55

Conread position: 4-177
Cow position: chr9:41318392-41318564 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 79, 127

Conread position: 4-183
Cow position: chr9:39994167-39994345 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 78, 132

Conread position: 5-115
Cow position: chr9:58125773-58125661 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 5-124
Cow position: chr9:42366416-42366299 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 63

Conread position: 5-181
Cow position: chr9:13071952-13071783 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 74, 50

Conread position: 6-131
Cow position: chr9:26033690-26033816 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 77, 124

Conread position: 6-158
Cow position: chr9:43609281-43609126 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 118, 80

Conread position: 6-173
Cow position: chr9:34188575-34188409 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 76, 26

Conread position: 6-176
Cow position: chr9:26585309-26585141 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 40

Conread position: 7-172
Cow position: chr9:19835797-19835963 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 42

Conread position: 7-196
Cow position: chr9:55203064-55203248 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 129

Conread position: 8-197
Cow position: chr9:14731928-14731746 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 74, 118

Conread position: 9-170
Cow position: chr9:416871-416711 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 120

Conread position: 10-162
Cow position: chr9:56795134-56795281 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 49

Conread position: 10-171
Cow position: chr9:1517697-1517860 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 125

Conread position: 11-158
Cow position: chr9:4834574-4834428 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 72, 36

Conread position: 11-171
Cow position: chr9:8234200-8234040 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 73, 128

Conread position: 11-172
Cow position: chr9:35795019-35794859 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 72, 16

Conread position: 13-168
Cow position: chr9:5622457-5622612 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 122

Conread position: 13-169
Cow position: chr9:20394649-20394803 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 19

Conread position: 15-158
Cow position: chr9:23294228-23294085 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 116

Conread position: 17-172
Cow position: chr9:33326196-33326042 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 23

Conread position: 29-168
Cow position: chr9:35527059-35526920 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 107

Conread position: 42-174
Cow position: chr9:37301901-37301770 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 97

Show alignments to all cow chromosomes.