Cow genome map
| Conread name: | Ss1.1-rcbl0_022921.5 |
| Conread position: | 344-468 |
| Cow position: | chr16:38023995-38024119 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 345-492 |
| Cow position: | chr16:33203-33347 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 350-484 |
| Cow position: | chr16:32937200-32937333 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 350-485 |
| Cow position: | chr16:1959938-1959803 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-474 |
| Cow position: | chr16:3330625-3330736 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 359-474 |
| Cow position: | chr16:23671392-23671503 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 359-488 |
| Cow position: | chr16:25001608-25001475 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 359-489 |
| Cow position: | chr16:25442317-25442445 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 359-489 |
| Cow position: | chr16:26664442-26664568 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 359-492 |
| Cow position: | chr16:1860920-1861054 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 359-492 |
| Cow position: | chr16:5890687-5890819 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 359-492 |
| Cow position: | chr16:16520078-16519951 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 359-492 |
| Cow position: | chr16:16898144-16898272 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 362-472 |
| Cow position: | chr16:25189333-25189444 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 362-487 |
| Cow position: | chr16:19149905-19149786 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 365-489 |
| Cow position: | chr16:2726521-2726397 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-474 |
| Cow position: | chr16:49233787-49233679 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 366-484 |
| Cow position: | chr16:18678048-18678162 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 366-486 |
| Cow position: | chr16:15477536-15477657 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 101 |
| Conread position: | 366-487 |
| Cow position: | chr16:406344-406223 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-487 |
| Cow position: | chr16:14665116-14665000 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-487 |
| Cow position: | chr16:40557252-40557131 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:838011-838134 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:1432882-1433003 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:2410241-2410113 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:2482440-2482319 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:4301507-4301384 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:4478278-4478151 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:5485422-5485542 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:7465012-7465133 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:7675756-7675637 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:8815408-8815289 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 101, 24 |
| Conread position: | 366-489 |
| Cow position: | chr16:10438952-10439074 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:12537254-12537132 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:15185771-15185895 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:15567953-15568073 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 111, 24 |
| Conread position: | 366-489 |
| Cow position: | chr16:19778956-19778833 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:23251731-23251608 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:25342664-25342787 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:25456784-25456665 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:27732689-27732566 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:28470377-28470254 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:29047718-29047838 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:31591221-31591103 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:34530993-34531114 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:40295467-40295345 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:41165977-41165854 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:43896567-43896446 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 366-489 |
| Cow position: | chr16:51084848-51084973 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 366-489 |
| Cow position: | chr16:54324643-54324519 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:2238071-2237947 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:3088507-3088385 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:5527692-5527566 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:5662532-5662658 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:17056281-17056154 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:18497624-18497498 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:19080663-19080789 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:20202668-20202791 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:27594200-27594326 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:28196548-28196422 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:37480163-37480036 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:49255534-49255414 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-492 |
| Cow position: | chr16:51403184-51403056 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 367-474 |
| Cow position: | chr16:16229014-16229121 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-489 |
| Cow position: | chr16:23983994-23984116 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-492 |
| Cow position: | chr16:10374902-10374777 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-471 |
| Cow position: | chr16:18667083-18667186 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-487 |
| Cow position: | chr16:1566758-1566640 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.