Cow genome map
| Conread name: | Ss1.1-rcbl0_022921.5 |
| Conread position: | 345-492 |
| Cow position: | chr2:6005943-6005796 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-492 |
| Cow position: | chr2:34052065-34052207 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-492 |
| Cow position: | chr2:44990398-44990252 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 350-492 |
| Cow position: | chr2:51618167-51618312 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 359-471 |
| Cow position: | chr2:54693865-54693977 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-489 |
| Cow position: | chr2:6880270-6880396 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 359-492 |
| Cow position: | chr2:44934070-44933940 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 362-475 |
| Cow position: | chr2:6962432-6962545 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-463 |
| Cow position: | chr2:11558706-11558803 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-478 |
| Cow position: | chr2:54408697-54408589 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 366-485 |
| Cow position: | chr2:9189100-9188985 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 366-485 |
| Cow position: | chr2:50982217-50982102 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 366-488 |
| Cow position: | chr2:1691890-1692008 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:211366-211245 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:281761-281638 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:364144-364021 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:5903419-5903295 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:8119467-8119590 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:10185303-10185182 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:10264483-10264364 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:11158196-11158075 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:12223354-12223232 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:13044789-13044662 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:15575928-15575805 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 366-489 |
| Cow position: | chr2:16901180-16901301 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:19012286-19012410 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:24925492-24925614 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:24926341-24926463 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:25743466-25743585 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:25887626-25887503 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:28648681-28648564 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:32065114-32064993 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:32458136-32458020 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:36981313-36981435 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:42669783-42669663 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:47602341-47602219 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:47811773-47811892 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:50078491-50078614 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:52063683-52063806 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:53540862-53540981 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:56888661-56888783 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:65937309-65937180 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 366-489 |
| Cow position: | chr2:80291840-80291717 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:174641-174518 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:2411859-2411733 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:3323642-3323516 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:4402227-4402101 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:9908837-9908963 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:9958150-9958024 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:10610722-10610596 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:12696544-12696418 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:14209899-14209774 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:14823972-14824095 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 366-492 |
| Cow position: | chr2:17424782-17424908 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:24471708-24471582 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:26904833-26904706 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:26922350-26922476 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:32656568-32656690 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:35356927-35357052 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:39422548-39422674 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:44092136-44092263 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:47037510-47037384 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:49628700-49628826 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:51988864-51988739 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:52617399-52617525 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:54738412-54738537 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:57336469-57336594 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:72688533-72688656 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 366-492 |
| Cow position: | chr2:78743491-78743610 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 367-487 |
| Cow position: | chr2:41687692-41687812 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-489 |
| Cow position: | chr2:10731934-10731816 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 367-489 |
| Cow position: | chr2:22078827-22078949 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-489 |
| Cow position: | chr2:28794165-28794284 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 367-489 |
| Cow position: | chr2:41048126-41048004 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-489 |
| Cow position: | chr2:81258101-81258223 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-492 |
| Cow position: | chr2:41154742-41154866 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 368-489 |
| Cow position: | chr2:36076325-36076207 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 371-492 |
| Cow position: | chr2:574518-574639 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 373-484 |
| Cow position: | chr2:16074605-16074499 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 379-492 |
| Cow position: | chr2:12363049-12362936 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.