Cow genome map
| Conread name: | Ss1.1-rcbl0_022921.5 |
| Conread position: | 350-489 |
| Cow position: | chr24:6323903-6323765 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 122, 70 |
| Conread position: | 359-484 |
| Cow position: | chr24:38638987-38639108 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 359-492 |
| Cow position: | chr24:12204879-12204750 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 359-492 |
| Cow position: | chr24:12238745-12238879 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 359-492 |
| Cow position: | chr24:25437744-25437872 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 359-492 |
| Cow position: | chr24:36723284-36723413 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 359-492 |
| Cow position: | chr24:42584302-42584166 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 366-465 |
| Cow position: | chr24:29304845-29304746 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-478 |
| Cow position: | chr24:14389070-14388959 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:147144-147021 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:6130279-6130404 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:6407503-6407623 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:8606284-8606407 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:9545523-9545645 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:12127646-12127520 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 366-489 |
| Cow position: | chr24:12334262-12334140 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:16560846-16560723 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 108 |
| Conread position: | 366-489 |
| Cow position: | chr24:19834872-19834997 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:22972530-22972655 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:29188762-29188877 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-489 |
| Cow position: | chr24:40468520-40468638 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:310335-310461 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:5991758-5991632 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:6023620-6023494 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:6142544-6142663 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:6435951-6436077 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:7063010-7063136 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:9187274-9187148 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:11151769-11151643 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:12149827-12149701 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 366-492 |
| Cow position: | chr24:12699356-12699230 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:13044160-13044034 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:13179551-13179426 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 366-492 |
| Cow position: | chr24:13189647-13189766 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:13233726-13233852 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:14755466-14755592 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:16083313-16083187 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:17322160-17322285 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:19702962-19703088 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 366-492 |
| Cow position: | chr24:23504392-23504266 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr24:33934856-33934981 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 366-492 |
| Cow position: | chr24:44018976-44019102 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-489 |
| Cow position: | chr24:12087668-12087790 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-492 |
| Cow position: | chr24:6036458-6036582 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 368-489 |
| Cow position: | chr24:9090584-9090461 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 371-489 |
| Cow position: | chr24:4414067-4413956 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 373-487 |
| Cow position: | chr24:41003961-41004075 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 375-492 |
| Cow position: | chr24:6963274-6963157 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-488 |
| Cow position: | chr24:36558073-36557961 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.