Cow genome map
| Conread name: | Ss1.1-rcbl0_022921.5 |
| Conread position: | 346-474 |
| Cow position: | chr29:5981338-5981209 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 350-489 |
| Cow position: | chr29:647189-647324 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 359-472 |
| Cow position: | chr29:38713054-38713167 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-488 |
| Cow position: | chr29:21425634-21425507 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 359-490 |
| Cow position: | chr29:252122-252248 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 359-492 |
| Cow position: | chr29:27262330-27262199 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 362-492 |
| Cow position: | chr29:42938805-42938675 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-469 |
| Cow position: | chr29:31182799-31182902 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-487 |
| Cow position: | chr29:409857-409736 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-487 |
| Cow position: | chr29:6264609-6264488 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-488 |
| Cow position: | chr29:5236412-5236534 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:2101230-2101353 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:2691554-2691677 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:2839951-2839828 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:7429733-7429612 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:10646859-10646738 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 39 |
| Conread position: | 366-489 |
| Cow position: | chr29:10822525-10822404 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:14210157-14210038 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:14587310-14587433 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:15997259-15997138 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:16023955-16024077 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:16345605-16345726 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:19621886-19621765 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:19655015-19655134 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:26163443-26163319 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:34798420-34798297 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:38228369-38228492 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 366-489 |
| Cow position: | chr29:39078320-39078197 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:42803787-42803906 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 366-489 |
| Cow position: | chr29:45461138-45461261 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:609253-609131 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:3328730-3328856 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:5958969-5959092 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:6198362-6198236 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 366-492 |
| Cow position: | chr29:7845781-7845907 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:9641395-9641268 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:10022941-10022815 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:13583472-13583598 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:13622467-13622341 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:13851482-13851354 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:14112938-14113060 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:18855554-18855428 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:19526895-19526769 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:19888978-19889103 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:21431460-21431335 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:27180362-27180236 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:27979529-27979403 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 366-492 |
| Cow position: | chr29:29502868-29502742 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:32287639-32287766 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 366-492 |
| Cow position: | chr29:32558360-32558234 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 366-492 |
| Cow position: | chr29:35298301-35298427 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:38207273-38207147 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr29:40501607-40501490 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 366-492 |
| Cow position: | chr29:42093156-42093282 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-487 |
| Cow position: | chr29:43324915-43325031 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 377-489 |
| Cow position: | chr29:23977525-23977637 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-489 |
| Cow position: | chr29:47048-46946 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 390-492 |
| Cow position: | chr29:13018113-13018215 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.