Cow genome map

Conread name: Ss1.1-rcbl0_022921.5

Conread position: 344-463
Cow position: chr3:74851843-74851724 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 350-492
Cow position: chr3:65208474-65208618 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 89, 49

Conread position: 359-478
Cow position: chr3:40616546-40616427 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 359-484
Cow position: chr3:31416320-31416441 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 109
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 359-484
Cow position: chr3:38494541-38494664 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 108

Conread position: 359-489
Cow position: chr3:23206572-23206444 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 359-492
Cow position: chr3:2509739-2509609 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 359-492
Cow position: chr3:2854146-2854013 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 359-492
Cow position: chr3:3058115-3058246 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 111, 89

Conread position: 359-492
Cow position: chr3:29579929-29580062 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 359-492
Cow position: chr3:32200320-32200450 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 359-492
Cow position: chr3:34198170-34198305 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 359-492
Cow position: chr3:56146603-56146736 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 359-492
Cow position: chr3:63002259-63002129 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 361-492
Cow position: chr3:68698671-68698540 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 364-492
Cow position: chr3:51938794-51938671 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 366-470
Cow position: chr3:2906462-2906359 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 55

Conread position: 366-485
Cow position: chr3:19799865-19799746 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 69

Conread position: 366-487
Cow position: chr3:30315856-30315976 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 366-487
Cow position: chr3:48058054-48057933 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 107
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 366-488
Cow position: chr3:6783674-6783797 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 366-488
Cow position: chr3:77579112-77578993 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 366-489
Cow position: chr3:595443-595565 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 366-489
Cow position: chr3:2709560-2709438 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 366-489
Cow position: chr3:5884838-5884958 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 366-489
Cow position: chr3:5952874-5952757 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 366-489
Cow position: chr3:5993773-5993651 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 366-489
Cow position: chr3:7478610-7478485 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 366-489
Cow position: chr3:10240960-10241083 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr3:18812805-18812928 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 108
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr3:21181386-21181268 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 366-489
Cow position: chr3:23289027-23288904 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 108
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr3:38867624-38867747 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 110
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr3:40824699-40824822 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 108
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr3:49136258-49136136 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 109
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 366-489
Cow position: chr3:49543897-49543781 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 366-489
Cow position: chr3:59862679-59862802 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 109
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr3:63240939-63240815 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 108
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 366-489
Cow position: chr3:64016058-64015937 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 366-489
Cow position: chr3:66621507-66621626 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 366-489
Cow position: chr3:68891263-68891141 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 366-489
Cow position: chr3:72631373-72631492 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 366-490
Cow position: chr3:34029613-34029490 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 366-490
Cow position: chr3:78026106-78025984 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 107
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 366-492
Cow position: chr3:1742638-1742764 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:2368030-2367904 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:2870095-2870221 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:2918776-2918902 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:3524322-3524444 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 366-492
Cow position: chr3:4287396-4287522 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:6687097-6687223 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:7157413-7157287 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:7247840-7247967 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 366-492
Cow position: chr3:16224192-16224317 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 366-492
Cow position: chr3:18860723-18860850 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 366-492
Cow position: chr3:19879951-19880077 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 89

Conread position: 366-492
Cow position: chr3:19940202-19940321 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 366-492
Cow position: chr3:20382335-20382469 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 366-492
Cow position: chr3:27919734-27919860 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:29329983-29329857 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:29575817-29575691 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:30330813-30330688 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 366-492
Cow position: chr3:30617613-30617487 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:32621734-32621609 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 366-492
Cow position: chr3:36863151-36863025 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:37970353-37970479 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:40338841-40338715 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:41209295-41209169 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 71

Conread position: 366-492
Cow position: chr3:42448423-42448548 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 366-492
Cow position: chr3:44925369-44925495 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:45034046-45034172 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:45975817-45975944 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 366-492
Cow position: chr3:46859983-46859858 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 366-492
Cow position: chr3:47080103-47079977 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:48843563-48843689 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 110
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:50916651-50916773 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 366-492
Cow position: chr3:51364479-51364356 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 366-492
Cow position: chr3:56327415-56327537 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 366-492
Cow position: chr3:64026828-64026702 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:66889660-66889537 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 366-492
Cow position: chr3:68872448-68872322 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:74058833-74058959 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr3:77424909-77425033 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 83, 106

Conread position: 367-470
Cow position: chr3:24588156-24588054 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 367-489
Cow position: chr3:57483415-57483296 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 367-492
Cow position: chr3:56295494-56295618 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 368-489
Cow position: chr3:36877343-36877222 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 106
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 369-484
Cow position: chr3:67164590-67164706 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 377-489
Cow position: chr3:3840199-3840087 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 396-492
Cow position: chr3:19945581-19945678 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 0

Show alignments to all cow chromosomes.