Cow genome map

Conread name: Ss1.1-rcbl0_022921.5

Conread position: 343-489
Cow position: chr6:41228770-41228917 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 21

Conread position: 346-483
Cow position: chr6:66546817-66546944 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 346-492
Cow position: chr6:66745323-66745470 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 37

Conread position: 350-489
Cow position: chr6:58601816-58601952 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 358-489
Cow position: chr6:36528554-36528684 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 33

Conread position: 359-489
Cow position: chr6:28134253-28134378 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 359-492
Cow position: chr6:12627046-12627179 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 362-492
Cow position: chr6:10339287-10339164 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 29

Conread position: 363-492
Cow position: chr6:40326766-40326895 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 8

Conread position: 365-492
Cow position: chr6:10645074-10645192 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 365-492
Cow position: chr6:50636216-50636346 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 96

Conread position: 366-454
Cow position: chr6:3785121-3785209 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 366-483
Cow position: chr6:16995749-16995866 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-483
Cow position: chr6:34890772-34890655 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 103
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-484
Cow position: chr6:3571945-3572063 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 110, 69

Conread position: 366-484
Cow position: chr6:27471926-27472044 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-487
Cow position: chr6:40553231-40553109 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 107
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 366-487
Cow position: chr6:65842966-65843087 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 107
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 366-488
Cow position: chr6:24262652-24262774 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-488
Cow position: chr6:55541905-55541783 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr6:50253-50130 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr6:476889-477012 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr6:703564-703685 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 366-489
Cow position: chr6:914986-915106 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 366-489
Cow position: chr6:1535222-1535105 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 58

Conread position: 366-489
Cow position: chr6:1821272-1821153 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 366-489
Cow position: chr6:3888161-3888042 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 366-489
Cow position: chr6:5948429-5948308 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 366-489
Cow position: chr6:8203543-8203663 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 24

Conread position: 366-489
Cow position: chr6:8759945-8759824 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 366-489
Cow position: chr6:11723842-11723725 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 366-489
Cow position: chr6:15139823-15139700 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr6:16591322-16591435 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 366-489
Cow position: chr6:17047412-17047533 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 366-489
Cow position: chr6:20559750-20559633 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 366-489
Cow position: chr6:21974021-21974144 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 106
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr6:24240758-24240878 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 108
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 366-489
Cow position: chr6:27170931-27171054 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr6:27528662-27528544 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 366-489
Cow position: chr6:30273543-30273420 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 109
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr6:35875354-35875237 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 366-489
Cow position: chr6:39333523-39333399 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 366-489
Cow position: chr6:40865970-40865847 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr6:41190649-41190768 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 366-489
Cow position: chr6:47041858-47041734 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 366-489
Cow position: chr6:51087293-51087413 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 366-489
Cow position: chr6:51715883-51716006 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr6:51731435-51731554 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 366-489
Cow position: chr6:52694377-52694500 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 70

Conread position: 366-489
Cow position: chr6:68028276-68028399 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 366-490
Cow position: chr6:3487074-3486948 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 366-492
Cow position: chr6:330113-329987 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:1403966-1403840 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:1410032-1409906 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:2376035-2376156 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 366-492
Cow position: chr6:2877333-2877207 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:3150585-3150711 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:5749275-5749401 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:7139990-7139864 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:10250254-10250131 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 366-492
Cow position: chr6:11871304-11871178 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:12664969-12664844 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 366-492
Cow position: chr6:13310028-13309902 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:13848422-13848546 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 366-492
Cow position: chr6:13945263-13945389 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:16053460-16053587 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 366-492
Cow position: chr6:26669511-26669385 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:28104510-28104387 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 366-492
Cow position: chr6:28187469-28187343 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:28490215-28490091 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 366-492
Cow position: chr6:28703359-28703233 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:28766689-28766563 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:38272920-38273045 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 366-492
Cow position: chr6:39910689-39910810 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 366-492
Cow position: chr6:40379280-40379154 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:43619074-43619200 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:43792218-43792092 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 61, 71

Conread position: 366-492
Cow position: chr6:44002024-44002150 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:44149197-44149071 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:45587302-45587428 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:47047830-47047704 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:47625413-47625538 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 366-492
Cow position: chr6:50645830-50645704 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr6:65820619-65820494 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 77

Conread position: 367-485
Cow position: chr6:58460967-58460848 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 367-489
Cow position: chr6:184190-184069 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 367-489
Cow position: chr6:25215569-25215691 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 367-489
Cow position: chr6:25792405-25792283 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 367-492
Cow position: chr6:40276435-40276559 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 368-483
Cow position: chr6:3276015-3275900 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 102
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 368-492
Cow position: chr6:46602890-46602766 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.