Cow genome map
| Conread name: | Ss1.1-rcbl0_022921.5 | 
| Conread position: | 343-489 | 
| Cow position: | chr6:41228770-41228917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 40, 21 | 
| Conread position: | 346-483 | 
| Cow position: | chr6:66546817-66546944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 346-492 | 
| Cow position: | chr6:66745323-66745470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 9, 37 | 
| Conread position: | 350-489 | 
| Cow position: | chr6:58601816-58601952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 358-489 | 
| Cow position: | chr6:36528554-36528684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 7, 33 | 
| Conread position: | 359-489 | 
| Cow position: | chr6:28134253-28134378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 359-492 | 
| Cow position: | chr6:12627046-12627179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 362-492 | 
| Cow position: | chr6:10339287-10339164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 7, 29 | 
| Conread position: | 363-492 | 
| Cow position: | chr6:40326766-40326895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 19, 8 | 
| Conread position: | 365-492 | 
| Cow position: | chr6:10645074-10645192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 365-492 | 
| Cow position: | chr6:50636216-50636346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 47, 96 | 
| Conread position: | 366-454 | 
| Cow position: | chr6:3785121-3785209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 89 | 
| Alignm identity: | 76 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-483 | 
| Cow position: | chr6:16995749-16995866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-483 | 
| Cow position: | chr6:34890772-34890655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-484 | 
| Cow position: | chr6:3571945-3572063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 110, 69 | 
| Conread position: | 366-484 | 
| Cow position: | chr6:27471926-27472044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-487 | 
| Cow position: | chr6:40553231-40553109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 366-487 | 
| Cow position: | chr6:65842966-65843087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-488 | 
| Cow position: | chr6:24262652-24262774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-488 | 
| Cow position: | chr6:55541905-55541783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:50253-50130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:476889-477012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:703564-703685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:914986-915106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:1535222-1535105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 44, 58 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:1821272-1821153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:3888161-3888042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:5948429-5948308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:8203543-8203663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 84, 24 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:8759945-8759824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:11723842-11723725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:15139823-15139700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:16591322-16591435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:17047412-17047533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:20559750-20559633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:21974021-21974144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:24240758-24240878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 106, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:27170931-27171054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:27528662-27528544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:30273543-30273420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:35875354-35875237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:39333523-39333399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:40865970-40865847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:41190649-41190768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:47041858-47041734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:51087293-51087413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:51715883-51716006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:51731435-51731554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:52694377-52694500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 28, 70 | 
| Conread position: | 366-489 | 
| Cow position: | chr6:68028276-68028399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-490 | 
| Cow position: | chr6:3487074-3486948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:330113-329987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:1403966-1403840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:1410032-1409906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:2376035-2376156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:2877333-2877207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:3150585-3150711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:5749275-5749401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:7139990-7139864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:10250254-10250131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:11871304-11871178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:12664969-12664844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:13310028-13309902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:13848422-13848546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:13945263-13945389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:16053460-16053587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:26669511-26669385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:28104510-28104387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:28187469-28187343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:28490215-28490091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:28703359-28703233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:28766689-28766563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:38272920-38273045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:39910689-39910810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:40379280-40379154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:43619074-43619200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:43792218-43792092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 61, 71 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:44002024-44002150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:44149197-44149071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:45587302-45587428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:47047830-47047704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:47625413-47625538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:50645830-50645704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 366-492 | 
| Cow position: | chr6:65820619-65820494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 64, 77 | 
| Conread position: | 367-485 | 
| Cow position: | chr6:58460967-58460848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 367-489 | 
| Cow position: | chr6:184190-184069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 367-489 | 
| Cow position: | chr6:25215569-25215691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 367-489 | 
| Cow position: | chr6:25792405-25792283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 367-492 | 
| Cow position: | chr6:40276435-40276559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 368-483 | 
| Cow position: | chr6:3276015-3275900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 368-492 | 
| Cow position: | chr6:46602890-46602766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
