Cow genome map

Conread name: Ss1.1-rcbl0_022921.5

Conread position: 343-492
Cow position: chr8:41644081-41643933 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 48

Conread position: 344-460
Cow position: chr8:1118158-1118276 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 346-488
Cow position: chr8:23135003-23134852 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 48

Conread position: 359-466
Cow position: chr8:49697368-49697263 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 359-474
Cow position: chr8:50959989-50959874 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 78

Conread position: 359-488
Cow position: chr8:20135824-20135695 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 359-492
Cow position: chr8:28878635-28878764 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 359-492
Cow position: chr8:39591632-39591502 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 359-492
Cow position: chr8:53428107-53428240 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 359-492
Cow position: chr8:56884152-56884280 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 364-489
Cow position: chr8:10742022-10741895 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 365-469
Cow position: chr8:46421697-46421801 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 76

Conread position: 366-475
Cow position: chr8:25412249-25412353 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 366-475
Cow position: chr8:27580027-27580136 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 366-482
Cow position: chr8:20991567-20991683 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 366-482
Cow position: chr8:25377606-25377723 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 366-482
Cow position: chr8:46051812-46051929 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 366-483
Cow position: chr8:49218353-49218468 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 366-483
Cow position: chr8:50929487-50929361 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 366-487
Cow position: chr8:12313779-12313655 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 366-487
Cow position: chr8:14590251-14590130 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-488
Cow position: chr8:8912111-8912230 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 106
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 366-489
Cow position: chr8:3786258-3786380 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 45

Conread position: 366-489
Cow position: chr8:3855397-3855274 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:4688029-4688151 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 366-489
Cow position: chr8:6764658-6764539 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 366-489
Cow position: chr8:7162525-7162648 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:11803450-11803566 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 366-489
Cow position: chr8:11834148-11834276 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 93

Conread position: 366-489
Cow position: chr8:12450671-12450794 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:17312683-17312806 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:19052079-19052202 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:19332201-19332323 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 80, 111

Conread position: 366-489
Cow position: chr8:23772273-23772390 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 366-489
Cow position: chr8:24914692-24914571 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 108
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 366-489
Cow position: chr8:25524027-25524142 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 366-489
Cow position: chr8:25775033-25774910 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:32041136-32041012 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 366-489
Cow position: chr8:32317915-32317798 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 366-489
Cow position: chr8:33590010-33590133 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 111
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:35470929-35471052 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:36634882-36634759 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:38392255-38392377 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 366-489
Cow position: chr8:39194586-39194463 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 108
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:42485542-42485661 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 366-489
Cow position: chr8:45794125-45794001 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 366-489
Cow position: chr8:47075789-47075907 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 366-489
Cow position: chr8:47660694-47660571 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 109
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 366-489
Cow position: chr8:51857598-51857717 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 366-489
Cow position: chr8:59261312-59261194 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 366-492
Cow position: chr8:44912-44789 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 366-492
Cow position: chr8:1152663-1152537 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:1347623-1347497 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 72

Conread position: 366-492
Cow position: chr8:2168893-2168767 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:2887380-2887506 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:3748573-3748447 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:8516969-8516845 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 366-492
Cow position: chr8:9736870-9737002 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 366-492
Cow position: chr8:10749982-10750104 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 366-492
Cow position: chr8:14255810-14255936 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:14256707-14256833 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:14631036-14630910 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:21157163-21157036 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 366-492
Cow position: chr8:22570677-22570551 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:32436455-32436326 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 366-492
Cow position: chr8:32630405-32630280 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 366-492
Cow position: chr8:33325679-33325804 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 366-492
Cow position: chr8:34349298-34349424 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:37654231-37654105 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:37655928-37655802 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:37932723-37932849 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:39820079-39820205 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:42418809-42418685 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 366-492
Cow position: chr8:47453971-47453845 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 366-492
Cow position: chr8:47887474-47887597 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 367-489
Cow position: chr8:11824524-11824646 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 367-489
Cow position: chr8:14927257-14927134 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 367-489
Cow position: chr8:50995415-50995537 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 367-490
Cow position: chr8:58184965-58184845 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 30

Conread position: 367-492
Cow position: chr8:9539074-9538956 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 367-492
Cow position: chr8:21250854-21250979 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 367-492
Cow position: chr8:30155735-30155855 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 367-492
Cow position: chr8:51666187-51666063 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 368-489
Cow position: chr8:5017816-5017930 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 369-492
Cow position: chr8:9639506-9639630 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 387-492
Cow position: chr8:51068349-51068244 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 394-492
Cow position: chr8:47068161-47068063 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.