Cow genome map
| Conread name: | Ss1.1-rcbl0_022921.5 |
| Conread position: | 350-492 |
| Cow position: | chr9:20176442-20176304 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 359-471 |
| Cow position: | chr9:827832-827720 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 364-489 |
| Cow position: | chr9:2871607-2871736 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 365-487 |
| Cow position: | chr9:59447790-59447909 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 366-470 |
| Cow position: | chr9:3544162-3544269 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 366-479 |
| Cow position: | chr9:1995106-1994993 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-479 |
| Cow position: | chr9:5141981-5142091 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 111, 67 |
| Conread position: | 366-482 |
| Cow position: | chr9:26083289-26083172 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 366-485 |
| Cow position: | chr9:44819424-44819543 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 366-487 |
| Cow position: | chr9:2172229-2172341 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 366-487 |
| Cow position: | chr9:10937875-10937996 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-487 |
| Cow position: | chr9:46859179-46859058 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-488 |
| Cow position: | chr9:1074896-1074774 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:1250717-1250594 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:2497691-2497572 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:2679547-2679670 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:4533773-4533897 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:6250581-6250704 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:7004011-7004134 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:7060796-7060673 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:9014355-9014476 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:12913058-12913181 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 108 |
| Conread position: | 366-489 |
| Cow position: | chr9:17304695-17304572 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:18508543-18508423 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:19158254-19158130 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:20939591-20939714 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:21410581-21410710 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:22654859-22654982 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:26737193-26737313 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:27036182-27036305 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:27783471-27783588 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:29026927-29026804 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:29627471-29627349 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 366-489 |
| Cow position: | chr9:30673660-30673782 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:31808864-31808978 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:32970224-32970346 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:37161530-37161411 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:37969928-37969806 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:47003457-47003580 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:51180899-51180776 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:59481517-59481394 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-489 |
| Cow position: | chr9:59537378-59537503 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:221252-221127 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:3004964-3004838 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:3309896-3310020 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:4942529-4942402 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:7105148-7105022 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:7158658-7158534 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:8781629-8781503 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:13474493-13474369 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:17063104-17062978 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:25034281-25034155 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:25903804-25903930 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 366-492 |
| Cow position: | chr9:27935660-27935786 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:30828021-30828147 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:38677427-38677550 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:44384543-44384669 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:47043240-47043366 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:50093957-50093831 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:50791993-50792119 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-492 |
| Cow position: | chr9:64015390-64015264 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-475 |
| Cow position: | chr9:22436248-22436356 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-486 |
| Cow position: | chr9:5005266-5005385 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-489 |
| Cow position: | chr9:28023084-28023203 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 367-489 |
| Cow position: | chr9:42310959-42311081 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-492 |
| Cow position: | chr9:650744-650622 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 367-492 |
| Cow position: | chr9:2212421-2212546 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-492 |
| Cow position: | chr9:26567883-26568009 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 367-492 |
| Cow position: | chr9:31065999-31066124 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-492 |
| Cow position: | chr9:45874798-45874923 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-492 |
| Cow position: | chr9:51211964-51212089 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-489 |
| Cow position: | chr9:60276734-60276614 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 372-492 |
| Cow position: | chr9:60462639-60462519 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.