Cow genome map
| Conread name: | Ss1.1-rcbl0_023872.5 |
| Conread position: | 391-563 |
| Cow position: | chr11:27301595-27301420 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 391-612 |
| Cow position: | chr11:24301859-24302085 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 205 |
| Conread position: | 391-613 |
| Cow position: | chr11:12118493-12118712 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 407-559 |
| Cow position: | chr11:73328340-73328489 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 45 |
| Conread position: | 407-582 |
| Cow position: | chr11:64792499-64792322 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 407-612 |
| Cow position: | chr11:9314576-9314374 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 136, 51 |
| Conread position: | 407-612 |
| Cow position: | chr11:11450332-11450130 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 136, 51 |
| Conread position: | 407-612 |
| Cow position: | chr11:23116711-23116916 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 407-612 |
| Cow position: | chr11:69614951-69614746 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 407-612 |
| Cow position: | chr11:75360578-75360378 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 111 |
| Conread position: | 407-612 |
| Cow position: | chr11:79741314-79741100 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 187 |
| Conread position: | 407-613 |
| Cow position: | chr11:35569985-35569768 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 195 |
| Conread position: | 407-614 |
| Cow position: | chr11:18756089-18756295 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 127 |
| Conread position: | 410-612 |
| Cow position: | chr11:67863004-67862801 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 131, 187 |
| Conread position: | 412-612 |
| Cow position: | chr11:17453319-17453518 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 412-612 |
| Cow position: | chr11:21155410-21155221 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 414-612 |
| Cow position: | chr11:37159816-37160014 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 177 |
| Conread position: | 416-612 |
| Cow position: | chr11:19536809-19536620 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 417-612 |
| Cow position: | chr11:61313551-61313359 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 122, 68 |
| Conread position: | 448-612 |
| Cow position: | chr11:34655699-34655855 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.