Cow genome map
| Conread name: | Ss1.1-rcbl0_023872.5 |
| Conread position: | 5-145 |
| Cow position: | chr7:6658497-6658638 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 38-326 |
| Cow position: | chr7:6693361-6693638 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 67, 111 |
| Conread position: | 38-504 |
| Cow position: | chr7:6710585-6710138 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 94 |
| Conread position: | 179-612 |
| Cow position: | chr7:11738805-11739236 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 256, 295 |
| Conread position: | 187-313 |
| Cow position: | chr7:6658886-6659014 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 315-612 |
| Cow position: | chr7:6659364-6659662 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 390-612 |
| Cow position: | chr7:39924968-39925189 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 201 |
| Conread position: | 391-611 |
| Cow position: | chr7:25016005-25015786 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 391-611 |
| Cow position: | chr7:25024712-25024493 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 391-612 |
| Cow position: | chr7:43126789-43127009 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 407-519 |
| Cow position: | chr7:16570718-16570832 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 407-593 |
| Cow position: | chr7:26378702-26378891 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 407-612 |
| Cow position: | chr7:4520263-4520473 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 407-612 |
| Cow position: | chr7:33063324-33063118 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 123 |
| Conread position: | 407-612 |
| Cow position: | chr7:51776619-51776822 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 409-612 |
| Cow position: | chr7:6694014-6694216 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 411-612 |
| Cow position: | chr7:34402989-34403190 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 180 |
| Conread position: | 412-595 |
| Cow position: | chr7:43367733-43367551 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 412-612 |
| Cow position: | chr7:23239986-23240183 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 412-612 |
| Cow position: | chr7:38993290-38993487 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 414-559 |
| Cow position: | chr7:5486422-5486274 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 414-612 |
| Cow position: | chr7:44304385-44304178 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 419-620 |
| Cow position: | chr7:34213196-34213399 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 423-612 |
| Cow position: | chr7:32437507-32437318 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 169 |
| Conread position: | 426-559 |
| Cow position: | chr7:29312751-29312886 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 88 |
Show alignments to all cow chromosomes.