Cow genome map

Conread name: Ss1.1-rcbr0_004351.5

Conread position: 188-452
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 180, 18

Conread position: 244-438
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 33

Conread position: 245-457
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 133, 5

Conread position: 246-379
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 247-426
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 8

Conread position: 247-440
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 121

Conread position: 248-440
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 126, 18

Conread position: 248-453
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 69

Conread position: 249-452
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 29

Conread position: 250-440
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 17

Conread position: 250-440
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 8

Conread position: 250-440
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 17

Conread position: 250-440
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 251-379
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 35

Conread position: 251-440
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 28

Conread position: 251-440
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 251-441
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 71, 20

Conread position: 252-451
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 68

Conread position: 252-452
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 46

Conread position: 253-452
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 65

Conread position: 254-440
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 190

Conread position: 255-367
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 22

Conread position: 255-437
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 116, 22

Conread position: 256-440
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 52

Conread position: 256-440
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 43

Conread position: 257-440
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 13

Conread position: 257-455
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 258-437
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 258-440
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 20

Conread position: 259-410
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 27, 8

Conread position: 259-436
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 260-378
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 260-440
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 260-440
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 8

Conread position: 261-367
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 261-378
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 261-378
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 261-431
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 261-440
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 261-440
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 20

Conread position: 261-441
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 74

Conread position: 262-415
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 18

Conread position: 262-440
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 262-441
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 117, 21

Conread position: 262-452
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 115, 0

Conread position: 262-470
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 54

Conread position: 263-379
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 263-429
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 17

Conread position: 263-440
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 115, 19

Conread position: 263-441
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 263-453
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 27

Conread position: 263-477
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 179

Conread position: 264-452
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 123, 19

Conread position: 264-456
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 13

Conread position: 265-377
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 20

Conread position: 266-363
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 267-377
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 267-447
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 267-452
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 268-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 268-440
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 153, 13

Conread position: 268-440
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 83

Conread position: 268-441
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 12

Conread position: 268-452
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 16

Conread position: 269-437
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 15

Conread position: 269-456
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 271-378
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 271-379
Cow position:
Alignm length: 109
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 271-379
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 49

Conread position: 271-419
Cow position:
Alignm length: 151
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 271-433
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 271-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 12

Conread position: 271-440
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 33

Conread position: 271-440
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 271-454
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 41

Conread position: 271-456
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 78

Conread position: 271-457
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 64

Conread position: 272-440
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 11

Conread position: 272-441
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 272-441
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 105, 12

Conread position: 273-452
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 155

Conread position: 273-477
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 203

Conread position: 275-437
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 75

Conread position: 278-440
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 279-440
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 139

Conread position: 279-451
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 87

Conread position: 280-438
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 280-439
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 82, 19

Conread position: 280-441
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 76

Conread position: 280-441
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 87

Conread position: 280-442
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 280-445
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 280-445
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 51

Conread position: 281-440
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 281-478
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 198

Conread position: 283-452
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 14

Conread position: 284-436
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 60

Conread position: 285-432
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 126, 71

Conread position: 285-438
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 285-438
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 136, 0

Conread position: 285-440
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 285-440
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 34

Conread position: 285-440
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 285-440
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 136, 79

Conread position: 285-441
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 93

Conread position: 285-441
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 285-441
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 136, 90

Conread position: 285-441
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 81, 114

Conread position: 285-450
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 103

Conread position: 285-452
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 111

Conread position: 285-452
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 285-452
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 285-477
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 192

Conread position: 288-452
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 93

Conread position: 289-440
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 289-440
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 70

Conread position: 289-441
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 290-440
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 294-438
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 55

Show alignments to all cow chromosomes.