Cow genome map

Conread name: Ss1.1-rcbr0_004351.5

Conread position: 194-425
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 13

Conread position: 228-429
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 20

Conread position: 230-480
Cow position:
Alignm length: 260
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 124

Conread position: 237-452
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 184, 10

Conread position: 245-438
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 32

Conread position: 246-445
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 25

Conread position: 247-474
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 24

Conread position: 249-453
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 123, 0

Conread position: 250-440
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 171, 106

Conread position: 250-445
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 17

Conread position: 251-440
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 16

Conread position: 251-440
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 170, 10

Conread position: 252-379
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 16

Conread position: 254-379
Cow position:
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 255-441
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 165, 22

Conread position: 255-480
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 13

Conread position: 256-429
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 116, 0

Conread position: 256-445
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 33, 5

Conread position: 257-440
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 25

Conread position: 257-440
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 164, 20

Conread position: 257-440
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 164, 20

Conread position: 257-445
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 166

Conread position: 258-453
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 259-440
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 118

Conread position: 259-452
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 259-452
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 26

Conread position: 259-455
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 30, 8

Conread position: 260-394
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 125

Conread position: 260-440
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 24

Conread position: 261-436
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 118, 19

Conread position: 261-440
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 261-440
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 173

Conread position: 261-443
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 116, 22

Conread position: 261-452
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 146

Conread position: 262-430
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 158, 23

Conread position: 262-439
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 96

Conread position: 262-452
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 67

Conread position: 262-458
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 25

Conread position: 263-379
Cow position:
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 263-445
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 263-452
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 264-378
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 264-452
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 265-378
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 265-440
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 127

Conread position: 266-379
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 266-438
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 267-433
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 18

Conread position: 267-435
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 113

Conread position: 267-440
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 267-452
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 154, 108

Conread position: 268-377
Cow position:
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 268-439
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 268-439
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 94

Conread position: 268-440
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 72

Conread position: 268-440
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 12

Conread position: 268-441
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 268-446
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 268-455
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 59

Conread position: 268-457
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 153, 89

Conread position: 269-438
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 69

Conread position: 269-440
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 83

Conread position: 270-379
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 270-437
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 270-452
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 102, 49

Conread position: 271-379
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 271-440
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 12

Conread position: 271-441
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 62

Conread position: 271-441
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 271-445
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 271-455
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 271-489
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 199

Conread position: 272-379
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 272-398
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 272-441
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 272-445
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 42

Conread position: 273-452
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 140

Conread position: 273-452
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 277-433
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 7

Conread position: 277-441
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 277-441
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 278-426
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 143, 97

Conread position: 278-440
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 279-457
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 37

Conread position: 279-474
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 187

Conread position: 280-437
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 280-440
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 280-440
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 280-440
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 91

Conread position: 280-440
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 280-440
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 280-440
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 110

Conread position: 280-445
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 15

Conread position: 280-452
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 283-416
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 283-440
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 52

Conread position: 284-438
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 96, 54

Conread position: 285-437
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 285-440
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 136, 0

Conread position: 285-440
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 0

Conread position: 285-441
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 285-441
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 285-441
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 285-452
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 285-452
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 64

Conread position: 285-455
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 286-440
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 297-440
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 297-452
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 117

Conread position: 298-438
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 77

Conread position: 302-440
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 302-442
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 119, 17

Show alignments to all cow chromosomes.