Cow genome map
Conread name: | Ss1.1-rcbr0_004351.5 |
Conread position: | 216-378 |
Cow position: | chr23:17792157-17792315 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 119 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 236-445 |
Cow position: | chr23:15286904-15287104 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 150 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 175, 13 |
Conread position: | 242-379 |
Cow position: | chr23:12031659-12031517 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 243-445 |
Cow position: | chr23:10676100-10675885 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 151 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 244-379 |
Cow position: | chr23:15099684-15099818 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 104 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 58, 23 |
Conread position: | 244-440 |
Cow position: | chr23:4803206-4802997 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 149 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 45, 17 |
Conread position: | 244-457 |
Cow position: | chr23:2471251-2471024 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 164 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 11, 26 |
Conread position: | 245-440 |
Cow position: | chr23:1490598-1490399 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 137 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 246-455 |
Cow position: | chr23:32621534-32621306 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 166 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 247-438 |
Cow position: | chr23:39778632-39778442 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 120, 13 |
Conread position: | 249-445 |
Cow position: | chr23:39056996-39056790 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 151 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 40, 22 |
Conread position: | 250-429 |
Cow position: | chr23:5453701-5453510 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 250-432 |
Cow position: | chr23:4338110-4338300 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 134 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 250-440 |
Cow position: | chr23:41348387-41348585 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 146 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 250-513 |
Cow position: | chr23:40737779-40738052 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 196 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 22, 35 |
Conread position: | 252-440 |
Cow position: | chr23:20539615-20539424 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 255-452 |
Cow position: | chr23:25884195-25883993 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 149 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 115, 5 |
Conread position: | 257-441 |
Cow position: | chr23:8293743-8293539 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 150 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 258-437 |
Cow position: | chr23:40348419-40348603 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 105, 24 |
Conread position: | 258-438 |
Cow position: | chr23:33232471-33232661 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 259-440 |
Cow position: | chr23:307689-307494 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 150 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 261-440 |
Cow position: | chr23:4003876-4003685 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 147 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 261-440 |
Cow position: | chr23:8063757-8063583 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 137 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 10, 103 |
Conread position: | 261-441 |
Cow position: | chr23:23104268-23104450 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 136 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 115, 16 |
Conread position: | 262-436 |
Cow position: | chr23:34264526-34264709 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 134 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 262-440 |
Cow position: | chr23:18901841-18902016 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 129 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 158, 94 |
Conread position: | 263-445 |
Cow position: | chr23:27026869-27027056 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 143 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 57, 8 |
Conread position: | 264-418 |
Cow position: | chr23:21539378-21539216 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 108, 20 |
Conread position: | 264-440 |
Cow position: | chr23:12363396-12363579 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 131 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 264-440 |
Cow position: | chr23:35239574-35239390 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 143 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 117, 55 |
Conread position: | 265-430 |
Cow position: | chr23:3890349-3890525 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 25, 174 |
Conread position: | 266-376 |
Cow position: | chr23:2111001-2110889 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 93 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 266-409 |
Cow position: | chr23:22704793-22704655 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 96, 12 |
Conread position: | 266-452 |
Cow position: | chr23:11225074-11224882 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 140 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 111, 11 |
Conread position: | 267-436 |
Cow position: | chr23:28574928-28574749 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 104, 137 |
Conread position: | 267-437 |
Cow position: | chr23:16447472-16447647 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 126 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 268-378 |
Cow position: | chr23:1337092-1337198 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 268-378 |
Cow position: | chr23:25726560-25726453 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 268-432 |
Cow position: | chr23:1429612-1429779 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 120 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 268-437 |
Cow position: | chr23:39813723-39813539 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 136 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 268-440 |
Cow position: | chr23:30617255-30617440 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 140 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 269-452 |
Cow position: | chr23:5617791-5617600 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 139 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 99, 8 |
Conread position: | 270-394 |
Cow position: | chr23:19295327-19295200 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 270-437 |
Cow position: | chr23:13410546-13410714 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 109, 12 |
Conread position: | 270-439 |
Cow position: | chr23:17392825-17392659 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 123 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 20, 88 |
Conread position: | 270-452 |
Cow position: | chr23:10888483-10888301 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 135 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 111, 12 |
Conread position: | 271-432 |
Cow position: | chr23:40081715-40081559 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 149, 86 |
Conread position: | 271-436 |
Cow position: | chr23:41107803-41107978 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 271-440 |
Cow position: | chr23:18739245-18739426 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 271-440 |
Cow position: | chr23:20557625-20557806 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 138 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 271-452 |
Cow position: | chr23:13073631-13073812 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 131 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 19, 49 |
Conread position: | 271-452 |
Cow position: | chr23:36200616-36200431 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 18, 109 |
Conread position: | 271-453 |
Cow position: | chr23:4291573-4291380 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 146 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 272-432 |
Cow position: | chr23:18489869-18489702 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 272-434 |
Cow position: | chr23:20271917-20272087 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 272-452 |
Cow position: | chr23:809722-809532 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 139 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 107, 83 |
Conread position: | 272-459 |
Cow position: | chr23:11250906-11250709 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 140 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 97, 70 |
Conread position: | 273-372 |
Cow position: | chr23:6672414-6672513 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 82 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 273-379 |
Cow position: | chr23:5605479-5605373 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 85 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 273-379 |
Cow position: | chr23:5612739-5612633 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 85 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 273-452 |
Cow position: | chr23:19739348-19739540 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 141 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 274-367 |
Cow position: | chr23:24479710-24479803 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 80 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 277-445 |
Cow position: | chr23:1759459-1759280 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 133 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 280-378 |
Cow position: | chr23:3244707-3244806 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 84 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 280-432 |
Cow position: | chr23:1194288-1194445 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 280-440 |
Cow position: | chr23:7709989-7709829 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 115 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 141, 85 |
Conread position: | 280-440 |
Cow position: | chr23:25933355-25933196 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 115 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 141, 68 |
Conread position: | 280-441 |
Cow position: | chr23:10853254-10853083 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 100, 46 |
Conread position: | 281-419 |
Cow position: | chr23:18710266-18710398 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 281-452 |
Cow position: | chr23:16582701-16582883 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 283-441 |
Cow position: | chr23:12138212-12138047 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 94, 52 |
Conread position: | 285-378 |
Cow position: | chr23:799464-799557 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 80 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 285-378 |
Cow position: | chr23:27307950-27307857 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 79 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 285-440 |
Cow position: | chr23:9726337-9726503 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 285-452 |
Cow position: | chr23:13137737-13137909 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 285-452 |
Cow position: | chr23:40444058-40443887 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 126 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 285-474 |
Cow position: | chr23:35930150-35929956 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 141 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 75, 34 |
Conread position: | 289-438 |
Cow position: | chr23:26949389-26949237 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 112 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 289-447 |
Cow position: | chr23:26975269-26975436 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 291-452 |
Cow position: | chr23:21423962-21423794 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 133 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 297-476 |
Cow position: | chr23:14580930-14580753 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 131 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 53, 19 |
Show alignments to all cow chromosomes.