Cow genome map


           Conread name:
           Ss1.1-rcbr0_004351.5
        

               Conread position:
               177-379
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               217-441
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               239-474
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               243-378
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               244-437
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               244-441
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               245-451
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 12
               

               Conread position:
               245-457
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               246-456
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               250-430
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               251-439
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 156
               

               Conread position:
               252-419
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               253-433
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               127, 8
               

               Conread position:
               253-462
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               255-440
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 22
               

               Conread position:
               256-378
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 61
               

               Conread position:
               256-440
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               256-440
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 5
               

               Conread position:
               256-445
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               256-452
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 56
               

               Conread position:
               257-445
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               257-452
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               257-456
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               258-431
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               259-440
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               17, 103
               

               Conread position:
               259-441
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               103, 18
               

               Conread position:
               259-452
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               261-441
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               13, 172
               

               Conread position:
               261-452
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               262-436
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               263-410
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               263-440
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               263-445
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               265-437
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 25
               

               Conread position:
               266-452
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               268-380
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               268-435
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               110, 16
               

               Conread position:
               268-440
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 167
               

               Conread position:
               268-441
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 152
               

               Conread position:
               268-445
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               268-452
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 148
               

               Conread position:
               268-453
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               268-457
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               107, 9
               

               Conread position:
               269-433
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               270-440
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               271-440
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               107, 53
               

               Conread position:
               271-441
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               271-457
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               128, 45
               

               Conread position:
               272-378
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               272-441
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               272-441
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               274-440
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               274-445
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 50
               

               Conread position:
               277-440
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               85, 109
               

               Conread position:
               278-425
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 126
               

               Conread position:
               280-379
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               280-379
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               280-408
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               280-438
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               280-440
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               280-441
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 38
               

               Conread position:
               280-455
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               280-455
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               5, 59
               

               Conread position:
               283-436
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 128
               

               Conread position:
               283-438
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               78, 106
               

               Conread position:
               284-451
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               285-394
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               285-433
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 34
               

               Conread position:
               285-434
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               95, 41
               

               Conread position:
               285-434
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               285-440
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               285-441
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               285-452
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               285-452
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               76, 144
               

               Conread position:
               289-440
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               289-441
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               132, 50
               

               Conread position:
               289-453
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               73, 108
               

               Conread position:
               291-440
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               294-440
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               297-455
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 0
               
Show alignments to all cow chromosomes.