Cow genome map
| Conread name: | Ss1.1-rcbr0_004351.5 |
| Conread position: | 8-266 |
| Cow position: | chr7:64732061-64731796 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 236-374 |
| Cow position: | chr7:29375820-29375963 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 236-457 |
| Cow position: | chr7:6690740-6690520 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 143, 11 |
| Conread position: | 237-457 |
| Cow position: | chr7:38357362-38357579 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 184, 23 |
| Conread position: | 238-440 |
| Cow position: | chr7:62953802-62953592 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 241-387 |
| Cow position: | chr7:8088575-8088714 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 243-440 |
| Cow position: | chr7:44942834-44942635 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 128, 12 |
| Conread position: | 244-440 |
| Cow position: | chr7:25722395-25722588 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 245-440 |
| Cow position: | chr7:32692743-32692949 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 248-445 |
| Cow position: | chr7:56893049-56893253 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 248-452 |
| Cow position: | chr7:24022198-24022397 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 173, 32 |
| Conread position: | 249-427 |
| Cow position: | chr7:17880692-17880878 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 249-440 |
| Cow position: | chr7:29479800-29479605 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 249-440 |
| Cow position: | chr7:32549130-32549333 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 249-452 |
| Cow position: | chr7:9816275-9816064 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 132, 28 |
| Conread position: | 250-378 |
| Cow position: | chr7:8832737-8832861 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 250-437 |
| Cow position: | chr7:23552691-23552883 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 32 |
| Conread position: | 250-445 |
| Cow position: | chr7:34216482-34216282 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 250-452 |
| Cow position: | chr7:51685290-51685080 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 251-439 |
| Cow position: | chr7:58800444-58800248 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 251-452 |
| Cow position: | chr7:38360959-38361172 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 251-455 |
| Cow position: | chr7:67099608-67099395 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 8 |
| Conread position: | 252-433 |
| Cow position: | chr7:63101680-63101502 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 252-455 |
| Cow position: | chr7:47931520-47931734 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 8 |
| Conread position: | 253-429 |
| Cow position: | chr7:3747522-3747349 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 168, 59 |
| Conread position: | 253-440 |
| Cow position: | chr7:18958266-18958463 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 254-437 |
| Cow position: | chr7:8289626-8289439 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 23 |
| Conread position: | 254-453 |
| Cow position: | chr7:42943579-42943374 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 255-440 |
| Cow position: | chr7:10385157-10384957 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 256-452 |
| Cow position: | chr7:26791784-26791573 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 256-452 |
| Cow position: | chr7:53996568-53996366 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 257-380 |
| Cow position: | chr7:35651458-35651580 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 257-440 |
| Cow position: | chr7:47547675-47547487 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 257-452 |
| Cow position: | chr7:249238-249439 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 23 |
| Conread position: | 258-440 |
| Cow position: | chr7:39093655-39093848 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 258-452 |
| Cow position: | chr7:35096758-35096959 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 9 |
| Conread position: | 259-445 |
| Cow position: | chr7:46823940-46823743 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 259-452 |
| Cow position: | chr7:14519775-14519975 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 260-440 |
| Cow position: | chr7:58330561-58330751 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 260-475 |
| Cow position: | chr7:24796441-24796664 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 261-379 |
| Cow position: | chr7:14816561-14816679 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 111, 10 |
| Conread position: | 261-437 |
| Cow position: | chr7:53862771-53862593 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 22 |
| Conread position: | 261-452 |
| Cow position: | chr7:8523516-8523714 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 261-452 |
| Cow position: | chr7:33104417-33104228 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 261-452 |
| Cow position: | chr7:44134680-44134878 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 118, 15 |
| Conread position: | 261-456 |
| Cow position: | chr7:519261-519464 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 114, 22 |
| Conread position: | 261-457 |
| Cow position: | chr7:30154741-30154945 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 262-379 |
| Cow position: | chr7:52755569-52755453 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 262-440 |
| Cow position: | chr7:36248357-36248175 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 262-452 |
| Cow position: | chr7:59438716-59438517 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 262-454 |
| Cow position: | chr7:41729043-41729242 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 263-378 |
| Cow position: | chr7:14496358-14496472 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 263-378 |
| Cow position: | chr7:17710398-17710283 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-437 |
| Cow position: | chr7:63772311-63772130 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 109, 21 |
| Conread position: | 263-440 |
| Cow position: | chr7:535453-535638 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 263-440 |
| Cow position: | chr7:29505372-29505193 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 13 |
| Conread position: | 263-452 |
| Cow position: | chr7:11511977-11511790 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 5 |
| Conread position: | 263-452 |
| Cow position: | chr7:30012088-30011898 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 263-455 |
| Cow position: | chr7:67873459-67873255 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 264-379 |
| Cow position: | chr7:53271087-53270972 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 264-438 |
| Cow position: | chr7:38429455-38429631 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 264-440 |
| Cow position: | chr7:29345654-29345824 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 264-440 |
| Cow position: | chr7:35779997-35779820 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 111, 18 |
| Conread position: | 264-441 |
| Cow position: | chr7:38347585-38347771 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 264-477 |
| Cow position: | chr7:13067422-13067199 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 214 |
| Conread position: | 266-439 |
| Cow position: | chr7:60547409-60547586 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 146 |
| Conread position: | 266-440 |
| Cow position: | chr7:31049341-31049514 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 155, 18 |
| Conread position: | 266-452 |
| Cow position: | chr7:33515153-33514958 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 5 |
| Conread position: | 267-441 |
| Cow position: | chr7:32693283-32693468 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 267-452 |
| Cow position: | chr7:3160056-3159870 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 99, 49 |
| Conread position: | 267-455 |
| Cow position: | chr7:28441434-28441240 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 268-377 |
| Cow position: | chr7:19330395-19330504 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-378 |
| Cow position: | chr7:23615693-23615805 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 268-430 |
| Cow position: | chr7:16285315-16285489 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 145 |
| Conread position: | 268-433 |
| Cow position: | chr7:64384854-64385027 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 268-435 |
| Cow position: | chr7:23624407-23624583 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 268-440 |
| Cow position: | chr7:9068335-9068522 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 268-440 |
| Cow position: | chr7:12918326-12918502 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 268-440 |
| Cow position: | chr7:49068579-49068763 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 268-441 |
| Cow position: | chr7:31885854-31885670 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 268-441 |
| Cow position: | chr7:63300459-63300273 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 268-452 |
| Cow position: | chr7:17782433-17782627 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 268-452 |
| Cow position: | chr7:61740268-61740457 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 268-462 |
| Cow position: | chr7:41111619-41111821 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 107, 134 |
| Conread position: | 269-427 |
| Cow position: | chr7:40710512-40710349 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 270-378 |
| Cow position: | chr7:52591746-52591852 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 270-443 |
| Cow position: | chr7:65619175-65619357 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 168 |
| Conread position: | 271-379 |
| Cow position: | chr7:22832499-22832391 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 271-379 |
| Cow position: | chr7:35088913-35088807 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 271-436 |
| Cow position: | chr7:23609636-23609459 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 271-438 |
| Cow position: | chr7:37651755-37651576 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 271-439 |
| Cow position: | chr7:42335577-42335405 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 271-440 |
| Cow position: | chr7:23256007-23255832 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 271-440 |
| Cow position: | chr7:57506531-57506703 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 271-441 |
| Cow position: | chr7:40061196-40061373 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 12 |
| Conread position: | 271-445 |
| Cow position: | chr7:44596448-44596629 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 271-445 |
| Cow position: | chr7:51039687-51039505 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 48 |
| Conread position: | 271-451 |
| Cow position: | chr7:54108613-54108800 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 130, 115 |
| Conread position: | 271-455 |
| Cow position: | chr7:58967528-58967329 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 271-476 |
| Cow position: | chr7:19466003-19466207 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 150, 118 |
| Conread position: | 271-489 |
| Cow position: | chr7:10885153-10884922 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 272-412 |
| Cow position: | chr7:19671897-19671754 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 272-440 |
| Cow position: | chr7:12488678-12488511 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 76 |
| Conread position: | 272-440 |
| Cow position: | chr7:25263624-25263446 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 107, 70 |
| Conread position: | 272-440 |
| Cow position: | chr7:32946319-32946146 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 272-441 |
| Cow position: | chr7:53791340-53791514 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 272-452 |
| Cow position: | chr7:8387156-8387348 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 273-440 |
| Cow position: | chr7:8810062-8809883 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 273-440 |
| Cow position: | chr7:16022546-16022373 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 273-456 |
| Cow position: | chr7:47523466-47523278 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 274-394 |
| Cow position: | chr7:43457419-43457537 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 274-410 |
| Cow position: | chr7:7907722-7907860 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 275-419 |
| Cow position: | chr7:19652186-19652333 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 277-379 |
| Cow position: | chr7:53983354-53983252 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-443 |
| Cow position: | chr7:41122020-41122192 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 277-445 |
| Cow position: | chr7:10559732-10559909 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 277-453 |
| Cow position: | chr7:31074323-31074511 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 277-454 |
| Cow position: | chr7:21228295-21228486 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 278-440 |
| Cow position: | chr7:21573815-21573649 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 278-452 |
| Cow position: | chr7:57659914-57660099 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 279-440 |
| Cow position: | chr7:18016918-18016752 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 279-445 |
| Cow position: | chr7:51020027-51019851 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 280-379 |
| Cow position: | chr7:39621422-39621322 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 280-379 |
| Cow position: | chr7:68172911-68173010 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-416 |
| Cow position: | chr7:40361899-40361753 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 280-419 |
| Cow position: | chr7:40412837-40412692 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 280-432 |
| Cow position: | chr7:11066717-11066565 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 141, 43 |
| Conread position: | 280-437 |
| Cow position: | chr7:17000975-17000807 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 280-437 |
| Cow position: | chr7:30290697-30290864 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 280-440 |
| Cow position: | chr7:26909517-26909684 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 280-440 |
| Cow position: | chr7:40321725-40321566 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 280-440 |
| Cow position: | chr7:40414756-40414919 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 280-441 |
| Cow position: | chr7:28109828-28109657 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 126 |
| Conread position: | 280-441 |
| Cow position: | chr7:55315958-55316126 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 280-451 |
| Cow position: | chr7:14029552-14029377 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 159 |
| Conread position: | 280-452 |
| Cow position: | chr7:18388148-18388333 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 280-452 |
| Cow position: | chr7:53834342-53834525 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 280-455 |
| Cow position: | chr7:29474904-29474729 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 96 |
| Conread position: | 280-461 |
| Cow position: | chr7:25393546-25393355 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 280-488 |
| Cow position: | chr7:48020671-48020458 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 188 |
| Conread position: | 281-440 |
| Cow position: | chr7:11796658-11796824 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 281-452 |
| Cow position: | chr7:39528546-39528719 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 145 |
| Conread position: | 281-455 |
| Cow position: | chr7:40344633-40344810 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 169 |
| Conread position: | 283-440 |
| Cow position: | chr7:29300534-29300689 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 138, 11 |
| Conread position: | 283-440 |
| Cow position: | chr7:33698197-33698033 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 283-451 |
| Cow position: | chr7:54090730-54090557 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 116, 103 |
| Conread position: | 283-452 |
| Cow position: | chr7:206658-206491 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 283-452 |
| Cow position: | chr7:12484545-12484364 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 283-452 |
| Cow position: | chr7:53579145-53579325 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 285-432 |
| Cow position: | chr7:27031032-27031180 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 285-440 |
| Cow position: | chr7:28428511-28428357 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 136, 90 |
| Conread position: | 285-441 |
| Cow position: | chr7:42898884-42899040 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 102 |
| Conread position: | 285-445 |
| Cow position: | chr7:9434230-9434061 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 63 |
| Conread position: | 285-451 |
| Cow position: | chr7:27290255-27290434 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 285-473 |
| Cow position: | chr7:9858593-9858403 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 91, 82 |
| Conread position: | 286-441 |
| Cow position: | chr7:4765079-4764922 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 286-453 |
| Cow position: | chr7:30017282-30017453 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 64, 89 |
| Conread position: | 287-441 |
| Cow position: | chr7:7535774-7535617 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 289-480 |
| Cow position: | chr7:14536051-14536241 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 132, 154 |
| Conread position: | 294-440 |
| Cow position: | chr7:34464586-34464436 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 297-439 |
| Cow position: | chr7:5724404-5724259 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 301-440 |
| Cow position: | chr7:11884058-11884203 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 441-548 |
| Cow position: | chr7:64731808-64731702 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.