Cow genome map
| Conread name: | Ss1.1-rcbr0_004351.5 |
| Conread position: | 224-452 |
| Cow position: | chr9:39148850-39149084 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 226-440 |
| Cow position: | chr9:26476973-26477209 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 238-439 |
| Cow position: | chr9:45141814-45141608 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 117 |
| Conread position: | 239-452 |
| Cow position: | chr9:28315211-28315434 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 125, 20 |
| Conread position: | 242-440 |
| Cow position: | chr9:20828690-20828899 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 242-452 |
| Cow position: | chr9:42061874-42062104 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 243-367 |
| Cow position: | chr9:39681086-39681213 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 243-436 |
| Cow position: | chr9:4629897-4630093 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 144 |
| Conread position: | 244-452 |
| Cow position: | chr9:48808939-48809143 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 177, 40 |
| Conread position: | 247-438 |
| Cow position: | chr9:11413323-11413137 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 174, 75 |
| Conread position: | 247-440 |
| Cow position: | chr9:5433433-5433625 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 249-378 |
| Cow position: | chr9:55013545-55013416 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 249-418 |
| Cow position: | chr9:31215871-31216050 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 249-440 |
| Cow position: | chr9:3198384-3198194 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 125, 36 |
| Conread position: | 249-440 |
| Cow position: | chr9:48046327-48046532 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 250-438 |
| Cow position: | chr9:17026989-17027188 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 250-452 |
| Cow position: | chr9:44396451-44396667 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 251-452 |
| Cow position: | chr9:55495191-55494981 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 53 |
| Conread position: | 252-439 |
| Cow position: | chr9:52755053-52754858 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 32 |
| Conread position: | 252-445 |
| Cow position: | chr9:45749230-45749435 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 253-445 |
| Cow position: | chr9:13670436-13670631 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 256-441 |
| Cow position: | chr9:39709649-39709851 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 257-440 |
| Cow position: | chr9:7409581-7409756 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 257-440 |
| Cow position: | chr9:52689813-52689618 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 257-440 |
| Cow position: | chr9:62724344-62724528 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 258-354 |
| Cow position: | chr9:62994804-62994899 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 259-439 |
| Cow position: | chr9:53762503-53762686 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 259-440 |
| Cow position: | chr9:40221380-40221193 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 259-445 |
| Cow position: | chr9:25375930-25375738 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 260-440 |
| Cow position: | chr9:34024505-34024692 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 260-452 |
| Cow position: | chr9:31344802-31344602 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 24 |
| Conread position: | 261-377 |
| Cow position: | chr9:53433105-53433222 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 261-379 |
| Cow position: | chr9:45170575-45170460 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 261-425 |
| Cow position: | chr9:51609089-51609253 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 261-435 |
| Cow position: | chr9:47517004-47517187 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 261-440 |
| Cow position: | chr9:12910595-12910408 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 261-440 |
| Cow position: | chr9:33101302-33101122 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 261-440 |
| Cow position: | chr9:36457800-36457992 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 261-440 |
| Cow position: | chr9:41728064-41728251 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 261-440 |
| Cow position: | chr9:50607126-50606952 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 261-452 |
| Cow position: | chr9:35295502-35295695 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 261-456 |
| Cow position: | chr9:16216782-16216991 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 261-474 |
| Cow position: | chr9:9091305-9091077 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 262-437 |
| Cow position: | chr9:34286605-34286789 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 262-438 |
| Cow position: | chr9:37286640-37286820 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 262-442 |
| Cow position: | chr9:35028356-35028170 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 110, 15 |
| Conread position: | 262-452 |
| Cow position: | chr9:18003373-18003187 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 262-453 |
| Cow position: | chr9:35933012-35932809 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 262-457 |
| Cow position: | chr9:22723778-22723573 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 262-461 |
| Cow position: | chr9:8992375-8992163 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-378 |
| Cow position: | chr9:38792827-38792938 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 263-379 |
| Cow position: | chr9:29091576-29091694 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 263-433 |
| Cow position: | chr9:19657164-19656990 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 14 |
| Conread position: | 263-441 |
| Cow position: | chr9:34410587-34410402 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 263-452 |
| Cow position: | chr9:11271536-11271350 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 263-452 |
| Cow position: | chr9:28156508-28156698 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 263-458 |
| Cow position: | chr9:27261584-27261379 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 116, 8 |
| Conread position: | 264-440 |
| Cow position: | chr9:35403388-35403576 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 264-457 |
| Cow position: | chr9:9573129-9573333 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 265-440 |
| Cow position: | chr9:11447999-11447815 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 265-452 |
| Cow position: | chr9:5900140-5899958 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 157, 19 |
| Conread position: | 266-440 |
| Cow position: | chr9:8645075-8645259 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 266-440 |
| Cow position: | chr9:23956167-23955987 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 267-431 |
| Cow position: | chr9:37016712-37016883 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 267-436 |
| Cow position: | chr9:36410536-36410359 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 268-384 |
| Cow position: | chr9:35845205-35845090 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 268-436 |
| Cow position: | chr9:37934427-37934247 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 268-436 |
| Cow position: | chr9:47510758-47510581 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 268-438 |
| Cow position: | chr9:28747704-28747529 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 268-440 |
| Cow position: | chr9:35832797-35832626 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 268-440 |
| Cow position: | chr9:41644943-41644757 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 268-440 |
| Cow position: | chr9:41785034-41785203 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 88 |
| Conread position: | 268-440 |
| Cow position: | chr9:61019553-61019369 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 268-441 |
| Cow position: | chr9:34196009-34196188 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 268-441 |
| Cow position: | chr9:48016803-48016974 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 15 |
| Conread position: | 268-441 |
| Cow position: | chr9:58448314-58448129 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 268-457 |
| Cow position: | chr9:20815680-20815878 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 268-468 |
| Cow position: | chr9:60741372-60741161 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 134 |
| Conread position: | 269-440 |
| Cow position: | chr9:34917363-34917192 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 101, 107 |
| Conread position: | 269-440 |
| Cow position: | chr9:56453158-56453331 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 99 |
| Conread position: | 269-441 |
| Cow position: | chr9:6397971-6397790 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 269-452 |
| Cow position: | chr9:17785755-17785561 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 152 |
| Conread position: | 269-454 |
| Cow position: | chr9:42264034-42264221 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 269-455 |
| Cow position: | chr9:7805596-7805784 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 148 |
| Conread position: | 269-455 |
| Cow position: | chr9:33838494-33838304 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 270-379 |
| Cow position: | chr9:52651678-52651568 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 270-382 |
| Cow position: | chr9:36693481-36693369 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 270-437 |
| Cow position: | chr9:59586129-59586301 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 270-440 |
| Cow position: | chr9:34760553-34760371 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 270-445 |
| Cow position: | chr9:26388031-26388206 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 120, 59 |
| Conread position: | 270-455 |
| Cow position: | chr9:15806113-15805914 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 271-379 |
| Cow position: | chr9:2984883-2984992 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 271-379 |
| Cow position: | chr9:63710973-63711081 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 271-397 |
| Cow position: | chr9:41053847-41053976 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 106, 53 |
| Conread position: | 271-419 |
| Cow position: | chr9:47469102-47469250 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 271-441 |
| Cow position: | chr9:52257644-52257469 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 271-441 |
| Cow position: | chr9:52763938-52763766 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 271-451 |
| Cow position: | chr9:58255312-58255499 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 271-452 |
| Cow position: | chr9:16115791-16115603 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 271-452 |
| Cow position: | chr9:32670130-32669942 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 99, 45 |
| Conread position: | 272-440 |
| Cow position: | chr9:36401843-36401672 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 272-441 |
| Cow position: | chr9:19718517-19718346 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 272-452 |
| Cow position: | chr9:4257160-4256982 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 273-378 |
| Cow position: | chr9:48344081-48343975 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 273-457 |
| Cow position: | chr9:34276395-34276200 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 274-452 |
| Cow position: | chr9:54598492-54598678 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 277-438 |
| Cow position: | chr9:12773516-12773681 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 278-440 |
| Cow position: | chr9:29819549-29819711 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 143, 123 |
| Conread position: | 279-442 |
| Cow position: | chr9:5110678-5110853 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 279-453 |
| Cow position: | chr9:61847291-61847118 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 142, 77 |
| Conread position: | 280-378 |
| Cow position: | chr9:8537131-8537229 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-378 |
| Cow position: | chr9:52130835-52130935 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 280-379 |
| Cow position: | chr9:52510939-52511039 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 280-439 |
| Cow position: | chr9:51891075-51891238 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 280-440 |
| Cow position: | chr9:5399287-5399446 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 98, 127 |
| Conread position: | 280-440 |
| Cow position: | chr9:8613389-8613218 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 280-440 |
| Cow position: | chr9:9311683-9311851 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 280-440 |
| Cow position: | chr9:11123655-11123492 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 144 |
| Conread position: | 280-440 |
| Cow position: | chr9:22318185-22318342 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 82 |
| Conread position: | 280-440 |
| Cow position: | chr9:26394523-26394356 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 280-440 |
| Cow position: | chr9:34423443-34423614 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 280-440 |
| Cow position: | chr9:54681346-54681502 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 141, 39 |
| Conread position: | 280-441 |
| Cow position: | chr9:27279131-27279303 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 280-452 |
| Cow position: | chr9:151690-151873 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 7, 159 |
| Conread position: | 280-452 |
| Cow position: | chr9:5456347-5456170 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 280-452 |
| Cow position: | chr9:7543432-7543254 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 86, 36 |
| Conread position: | 280-452 |
| Cow position: | chr9:14738076-14738254 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 280-452 |
| Cow position: | chr9:50977431-50977247 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 280-452 |
| Cow position: | chr9:63785085-63784909 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 280-462 |
| Cow position: | chr9:28722527-28722719 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 65, 79 |
| Conread position: | 281-438 |
| Cow position: | chr9:52649022-52648866 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 75 |
| Conread position: | 281-440 |
| Cow position: | chr9:44822498-44822331 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 281-440 |
| Cow position: | chr9:47214724-47214552 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 281-443 |
| Cow position: | chr9:40586896-40587056 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 281-458 |
| Cow position: | chr9:10650463-10650288 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 282-440 |
| Cow position: | chr9:8629085-8628924 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 283-441 |
| Cow position: | chr9:61286589-61286756 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 283-452 |
| Cow position: | chr9:13744106-13743925 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 283-452 |
| Cow position: | chr9:44759099-44758926 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 283-452 |
| Cow position: | chr9:46981394-46981222 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 283-457 |
| Cow position: | chr9:51566670-51566485 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 285-379 |
| Cow position: | chr9:35491261-35491356 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 285-379 |
| Cow position: | chr9:58232494-58232400 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 285-440 |
| Cow position: | chr9:9358648-9358803 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 25 |
| Conread position: | 285-441 |
| Cow position: | chr9:30137953-30138113 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 68, 83 |
| Conread position: | 285-452 |
| Cow position: | chr9:2397640-2397812 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 96 |
| Conread position: | 285-477 |
| Cow position: | chr9:44584431-44584622 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 136, 80 |
| Conread position: | 289-440 |
| Cow position: | chr9:7806120-7805968 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 289-440 |
| Cow position: | chr9:47928754-47928899 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 122, 56 |
| Conread position: | 289-441 |
| Cow position: | chr9:26403629-26403779 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 71 |
| Conread position: | 289-441 |
| Cow position: | chr9:56065400-56065554 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 127 |
| Conread position: | 290-438 |
| Cow position: | chr9:34707475-34707321 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 127 |
| Conread position: | 290-451 |
| Cow position: | chr9:9724044-9723873 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 87, 163 |
| Conread position: | 290-452 |
| Cow position: | chr9:22152247-22152080 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 293-456 |
| Cow position: | chr9:54986323-54986146 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 294-441 |
| Cow position: | chr9:60355361-60355218 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 294-455 |
| Cow position: | chr9:22443784-22443618 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 296-440 |
| Cow position: | chr9:25400346-25400206 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 297-440 |
| Cow position: | chr9:32307392-32307238 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 297-452 |
| Cow position: | chr9:41964890-41964730 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 33 |
| Conread position: | 300-453 |
| Cow position: | chr9:58369148-58368990 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 301-455 |
| Cow position: | chr9:51721041-51720888 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 54 |
Show alignments to all cow chromosomes.