Cow genome map
| Conread name: | Ss1.1-rcbr0_004351.5 |
| Conread position: | 209-457 |
| Cow position: | chrX:44123557-44123301 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 13, 133 |
| Conread position: | 226-440 |
| Cow position: | chrX:23497403-23497628 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 233-452 |
| Cow position: | chrX:8642322-8642097 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 236-452 |
| Cow position: | chrX:18196281-18196067 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 238-428 |
| Cow position: | chrX:1571322-1571514 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 239-440 |
| Cow position: | chrX:30133048-30133255 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 241-379 |
| Cow position: | chrX:36963023-36962885 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 246-451 |
| Cow position: | chrX:40337180-40336961 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 246-457 |
| Cow position: | chrX:36367666-36367889 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 247-452 |
| Cow position: | chrX:20339626-20339841 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 248-370 |
| Cow position: | chrX:22134756-22134878 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 249-440 |
| Cow position: | chrX:41199485-41199287 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 249-456 |
| Cow position: | chrX:29681854-29682068 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 94, 126 |
| Conread position: | 250-393 |
| Cow position: | chrX:26625214-26625361 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 250-440 |
| Cow position: | chrX:15546147-15545945 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 250-440 |
| Cow position: | chrX:31436737-31436537 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 250-441 |
| Cow position: | chrX:26205196-26205386 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 250-452 |
| Cow position: | chrX:35285433-35285224 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 127, 18 |
| Conread position: | 250-457 |
| Cow position: | chrX:42449747-42449968 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 251-440 |
| Cow position: | chrX:1938273-1938077 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 252-440 |
| Cow position: | chrX:35885471-35885664 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 252-441 |
| Cow position: | chrX:4632596-4632795 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 254-440 |
| Cow position: | chrX:17498583-17498385 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 254-440 |
| Cow position: | chrX:27145863-27145667 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 255-379 |
| Cow position: | chrX:32590152-32590271 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 255-445 |
| Cow position: | chrX:27270623-27270433 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 113, 5 |
| Conread position: | 255-452 |
| Cow position: | chrX:42246924-42247131 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 122, 30 |
| Conread position: | 255-452 |
| Cow position: | chrX:46910067-46909866 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 256-440 |
| Cow position: | chrX:1499907-1499728 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 147, 30 |
| Conread position: | 256-440 |
| Cow position: | chrX:27431664-27431855 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 256-440 |
| Cow position: | chrX:32867125-32866938 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 256-441 |
| Cow position: | chrX:44040433-44040238 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 256-452 |
| Cow position: | chrX:47100339-47100546 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 257-440 |
| Cow position: | chrX:27668710-27668895 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 257-452 |
| Cow position: | chrX:46072574-46072766 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 257-483 |
| Cow position: | chrX:41790170-41790407 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 33, 219 |
| Conread position: | 258-379 |
| Cow position: | chrX:24170469-24170591 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 258-434 |
| Cow position: | chrX:45228729-45228555 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 153 |
| Conread position: | 258-440 |
| Cow position: | chrX:19717767-19717583 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 259-378 |
| Cow position: | chrX:3130897-3130778 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 8 |
| Conread position: | 259-419 |
| Cow position: | chrX:35509424-35509594 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 259-440 |
| Cow position: | chrX:3806935-3806745 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 259-440 |
| Cow position: | chrX:31489776-31489583 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 260-378 |
| Cow position: | chrX:34193831-34193945 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 260-455 |
| Cow position: | chrX:46588075-46587869 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 260-457 |
| Cow position: | chrX:4403571-4403363 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 261-429 |
| Cow position: | chrX:26720441-26720608 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 261-436 |
| Cow position: | chrX:19000380-19000193 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 261-440 |
| Cow position: | chrX:4169774-4169968 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 261-440 |
| Cow position: | chrX:20887395-20887578 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 261-452 |
| Cow position: | chrX:3580197-3579995 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 261-453 |
| Cow position: | chrX:33466872-33466672 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 261-456 |
| Cow position: | chrX:4327931-4328136 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 261-474 |
| Cow position: | chrX:17231990-17231765 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 219 |
| Conread position: | 262-440 |
| Cow position: | chrX:11454424-11454249 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 262-441 |
| Cow position: | chrX:11674362-11674172 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 262-441 |
| Cow position: | chrX:37956096-37955909 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 262-474 |
| Cow position: | chrX:33001150-33000935 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 200 |
| Conread position: | 263-367 |
| Cow position: | chrX:40480598-40480702 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-376 |
| Cow position: | chrX:11856659-11856539 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 263-379 |
| Cow position: | chrX:876598-876712 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 263-440 |
| Cow position: | chrX:25815650-25815838 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 8 |
| Conread position: | 263-452 |
| Cow position: | chrX:4268820-4269013 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 264-381 |
| Cow position: | chrX:38726185-38726071 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 265-452 |
| Cow position: | chrX:35410002-35409803 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 151 |
| Conread position: | 266-433 |
| Cow position: | chrX:33678223-33678403 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 266-457 |
| Cow position: | chrX:27442291-27442493 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 267-457 |
| Cow position: | chrX:41941867-41941669 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 110, 17 |
| Conread position: | 268-378 |
| Cow position: | chrX:783692-783580 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 268-379 |
| Cow position: | chrX:11517735-11517845 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 101, 9 |
| Conread position: | 268-379 |
| Cow position: | chrX:27508778-27508890 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 268-379 |
| Cow position: | chrX:42506701-42506812 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-440 |
| Cow position: | chrX:30962628-30962813 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 180 |
| Conread position: | 268-441 |
| Cow position: | chrX:14951108-14951291 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 268-441 |
| Cow position: | chrX:38321140-38321320 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 268-441 |
| Cow position: | chrX:41011135-41010960 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 98, 51 |
| Conread position: | 268-452 |
| Cow position: | chrX:16763688-16763874 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 268-459 |
| Cow position: | chrX:10415009-10415209 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 269-378 |
| Cow position: | chrX:11670933-11670822 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 269-379 |
| Cow position: | chrX:42159184-42159076 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 269-441 |
| Cow position: | chrX:16801024-16801201 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 8 |
| Conread position: | 270-375 |
| Cow position: | chrX:26850182-26850287 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 270-437 |
| Cow position: | chrX:37749751-37749918 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 270-452 |
| Cow position: | chrX:11633928-11633733 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 271-375 |
| Cow position: | chrX:42220460-42220563 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 271-425 |
| Cow position: | chrX:37717963-37717800 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 271-433 |
| Cow position: | chrX:28107087-28106917 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 271-439 |
| Cow position: | chrX:4559978-4559797 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 271-440 |
| Cow position: | chrX:11325868-11326034 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 271-440 |
| Cow position: | chrX:20957479-20957301 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 271-440 |
| Cow position: | chrX:39290596-39290419 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 271-440 |
| Cow position: | chrX:42875452-42875275 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 271-440 |
| Cow position: | chrX:42894163-42893989 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 271-451 |
| Cow position: | chrX:1101793-1101609 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 271-452 |
| Cow position: | chrX:12095529-12095721 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 271-452 |
| Cow position: | chrX:35276231-35276036 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 271-454 |
| Cow position: | chrX:31729681-31729490 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 271-455 |
| Cow position: | chrX:25207619-25207808 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 146 |
| Conread position: | 271-455 |
| Cow position: | chrX:43008854-43008656 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 271-457 |
| Cow position: | chrX:34441210-34441408 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 271-457 |
| Cow position: | chrX:41454711-41454908 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 271-461 |
| Cow position: | chrX:5487706-5487897 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 272-379 |
| Cow position: | chrX:6856101-6855994 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 272-435 |
| Cow position: | chrX:30789288-30789463 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 272-440 |
| Cow position: | chrX:16763007-16762834 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 94, 12 |
| Conread position: | 273-379 |
| Cow position: | chrX:19161892-19161996 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 273-457 |
| Cow position: | chrX:597237-597428 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 146 |
| Conread position: | 273-457 |
| Cow position: | chrX:24365581-24365775 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 274-377 |
| Cow position: | chrX:1464673-1464777 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 276-378 |
| Cow position: | chrX:15139260-15139362 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 277-437 |
| Cow position: | chrX:28850948-28850789 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 8 |
| Conread position: | 277-440 |
| Cow position: | chrX:11781484-11781316 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 278-438 |
| Cow position: | chrX:38094291-38094455 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 278-452 |
| Cow position: | chrX:33654607-33654793 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 279-440 |
| Cow position: | chrX:12977-12813 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 137 |
| Conread position: | 279-440 |
| Cow position: | chrX:24054895-24054740 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 279-441 |
| Cow position: | chrX:34398549-34398722 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 279-455 |
| Cow position: | chrX:16555989-16556170 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 126 |
| Conread position: | 280-378 |
| Cow position: | chrX:1996217-1996316 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 280-378 |
| Cow position: | chrX:17524150-17524248 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-387 |
| Cow position: | chrX:15545417-15545526 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 280-415 |
| Cow position: | chrX:27226717-27226581 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 97 |
| Conread position: | 280-440 |
| Cow position: | chrX:11589133-11589304 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 280-440 |
| Cow position: | chrX:20584545-20584391 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 141, 73 |
| Conread position: | 280-440 |
| Cow position: | chrX:27175234-27175061 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 280-440 |
| Cow position: | chrX:31442606-31442766 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 142, 81 |
| Conread position: | 280-440 |
| Cow position: | chrX:34836839-34837001 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 36 |
| Conread position: | 280-440 |
| Cow position: | chrX:42432284-42432445 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 79, 12 |
| Conread position: | 280-441 |
| Cow position: | chrX:51669-51839 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 280-441 |
| Cow position: | chrX:7648179-7648348 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 280-441 |
| Cow position: | chrX:16984869-16984703 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 113 |
| Conread position: | 280-452 |
| Cow position: | chrX:8759857-8759677 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 109 |
| Conread position: | 280-455 |
| Cow position: | chrX:25035148-25035335 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 280-455 |
| Cow position: | chrX:37751877-37752059 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 66 |
| Conread position: | 282-457 |
| Cow position: | chrX:38964328-38964154 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 138, 68 |
| Conread position: | 283-440 |
| Cow position: | chrX:20168785-20168621 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 283-440 |
| Cow position: | chrX:21328144-21327976 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 283-440 |
| Cow position: | chrX:40680845-40680677 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 283-441 |
| Cow position: | chrX:13924091-13923926 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 283-449 |
| Cow position: | chrX:23335745-23335922 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 283-452 |
| Cow position: | chrX:161630-161463 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 285-419 |
| Cow position: | chrX:19356692-19356548 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 285-440 |
| Cow position: | chrX:27261418-27261255 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 285-440 |
| Cow position: | chrX:27415359-27415517 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 48 |
| Conread position: | 285-440 |
| Cow position: | chrX:38218941-38218777 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 285-440 |
| Cow position: | chrX:46068536-46068696 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 285-452 |
| Cow position: | chrX:25925428-25925591 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 136, 31 |
| Conread position: | 285-452 |
| Cow position: | chrX:36283568-36283391 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 285-452 |
| Cow position: | chrX:36866401-36866224 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 128 |
| Conread position: | 285-452 |
| Cow position: | chrX:44055031-44054853 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 285-456 |
| Cow position: | chrX:36391960-36392138 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 93, 133 |
| Conread position: | 285-477 |
| Cow position: | chrX:11762783-11762974 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 136, 80 |
| Conread position: | 286-433 |
| Cow position: | chrX:41166602-41166755 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 286-440 |
| Cow position: | chrX:2551304-2551154 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 135, 70 |
| Conread position: | 286-440 |
| Cow position: | chrX:32910324-32910167 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 288-428 |
| Cow position: | chrX:29478947-29478798 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 288-438 |
| Cow position: | chrX:19761974-19761819 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 288-452 |
| Cow position: | chrX:4645689-4645862 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 289-379 |
| Cow position: | chrX:10479974-10479884 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 78 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-440 |
| Cow position: | chrX:11653991-11653833 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 289-442 |
| Cow position: | chrX:3494826-3494984 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 128 |
| Conread position: | 290-452 |
| Cow position: | chrX:35681790-35681618 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 296-452 |
| Cow position: | chrX:1360299-1360140 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 296-452 |
| Cow position: | chrX:41809958-41810117 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 301-440 |
| Cow position: | chrX:42836393-42836244 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 301-452 |
| Cow position: | chrX:47378918-47379070 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 76 |
Show alignments to all cow chromosomes.