Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-169
Cow position: chr1:56225507-56225334 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 63

Conread position: 1-169
Cow position: chr1:87440506-87440336 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 1-169
Cow position: chr1:89350003-89349830 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 69

Conread position: 1-182
Cow position: chr1:91023429-91023611 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 14

Conread position: 1-206
Cow position: chr1:85647742-85647944 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 14

Conread position: 1-209
Cow position: chr1:40600083-40599878 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 168

Conread position: 1-210
Cow position: chr1:86110699-86110898 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 58

Conread position: 1-220
Cow position: chr1:81290545-81290338 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 149

Conread position: 1-222
Cow position: chr1:90621468-90621689 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 90

Conread position: 1-222
Cow position: chr1:91874874-91875085 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 14

Conread position: 1-228
Cow position: chr1:89388382-89388151 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 111

Conread position: 1-230
Cow position: chr1:70435036-70434817 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 14

Conread position: 1-232
Cow position: chr1:99039317-99039537 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 68

Conread position: 1-233
Cow position: chr1:4291205-4290973 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 170

Conread position: 1-233
Cow position: chr1:35162448-35162218 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 14

Conread position: 1-233
Cow position: chr1:91800561-91800791 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position: chr1:4414169-4414394 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 19

Conread position: 1-234
Cow position: chr1:45288833-45289060 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 1-234
Cow position: chr1:48105393-48105620 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 29

Conread position: 1-234
Cow position: chr1:68618893-68619124 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 40

Conread position: 1-234
Cow position: chr1:78857291-78857509 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 58

Conread position: 1-234
Cow position: chr1:80900158-80899921 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 76

Conread position: 1-234
Cow position: chr1:84255805-84255568 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 14

Conread position: 1-234
Cow position: chr1:89509883-89510119 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 14

Conread position: 1-236
Cow position: chr1:83072479-83072255 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 112

Conread position: 1-240
Cow position: chr1:63390729-63390966 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position: chr1:196967-197201 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr1:20205068-20204833 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 24, 90

Conread position: 1-241
Cow position: chr1:25383706-25383469 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 34

Conread position: 1-241
Cow position: chr1:34159873-34159638 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 45

Conread position: 1-241
Cow position: chr1:37706932-37707162 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 60

Conread position: 1-241
Cow position: chr1:43389010-43389241 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 18

Conread position: 1-241
Cow position: chr1:43505567-43505330 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr1:45535745-45535508 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr1:47233440-47233668 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 10

Conread position: 1-241
Cow position: chr1:52039676-52039443 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 59

Conread position: 1-241
Cow position: chr1:52995062-52994830 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr1:55705208-55705447 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr1:56618612-56618872 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 68

Conread position: 1-241
Cow position: chr1:61741929-61742160 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 131

Conread position: 1-241
Cow position: chr1:62036840-62036607 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 50

Conread position: 1-241
Cow position: chr1:68855203-68854981 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 42

Conread position: 1-241
Cow position: chr1:71643625-71643857 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 19

Conread position: 1-241
Cow position: chr1:74955979-74956217 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr1:75744900-75744667 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 80

Conread position: 1-241
Cow position: chr1:79165044-79165284 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 60

Conread position: 1-241
Cow position: chr1:79844503-79844275 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 64

Conread position: 1-241
Cow position: chr1:81613427-81613192 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position: chr1:82884355-82884583 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 56

Conread position: 1-241
Cow position: chr1:91816733-91816967 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 76

Conread position: 1-241
Cow position: chr1:98030961-98030721 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position: chr1:100800391-100800162 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 65

Conread position: 1-242
Cow position: chr1:11226208-11226440 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 62

Conread position: 1-242
Cow position: chr1:57575726-57575962 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 14

Conread position: 1-242
Cow position: chr1:78811076-78810841 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 22, 42

Conread position: 1-244
Cow position: chr1:25734906-25734657 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 1-244
Cow position: chr1:92369776-92369533 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 177

Conread position: 1-245
Cow position: chr1:85028991-85028761 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 47

Conread position: 1-247
Cow position: chr1:724778-724534 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 9

Conread position: 1-252
Cow position: chr1:74822485-74822246 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 62

Conread position: 1-253
Cow position: chr1:99136392-99136637 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 24

Conread position: 1-254
Cow position: chr1:89497994-89497758 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 42

Conread position: 1-262
Cow position: chr1:54206776-54207035 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 176

Conread position: 2-234
Cow position: chr1:100393130-100393351 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 16

Conread position: 2-234
Cow position: chr1:101634749-101634515 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 38

Conread position: 2-237
Cow position: chr1:85162510-85162737 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 13

Conread position: 2-241
Cow position: chr1:1981076-1981303 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 13

Conread position: 2-241
Cow position: chr1:71253516-71253748 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 13

Conread position: 2-242
Cow position: chr1:12464627-12464858 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 74

Conread position: 3-230
Cow position: chr1:24445590-24445811 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 62

Conread position: 3-233
Cow position: chr1:18936797-18937019 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 38

Conread position: 4-241
Cow position: chr1:71078925-71079150 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 51

Conread position: 5-232
Cow position: chr1:61884947-61884731 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 64

Conread position: 5-235
Cow position: chr1:98551754-98551525 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 166

Conread position: 5-236
Cow position: chr1:95499462-95499684 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 10

Conread position: 5-241
Cow position: chr1:93499653-93499429 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 10

Conread position: 6-234
Cow position: chr1:81568995-81569221 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 9

Conread position: 7-168
Cow position: chr1:44155281-44155118 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 89

Conread position: 7-241
Cow position: chr1:73960735-73960508 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 52

Conread position: 7-242
Cow position: chr1:72034894-72035124 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 17

Conread position: 8-234
Cow position: chr1:3323900-3323672 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 56

Conread position: 8-241
Cow position: chr1:61735403-61735632 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 86

Conread position: 9-241
Cow position: chr1:90864262-90864493 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 52

Conread position: 9-242
Cow position: chr1:78783579-78783352 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 55

Conread position: 10-241
Cow position: chr1:95687072-95687299 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 14

Conread position: 12-241
Cow position: chr1:71295270-71295508 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 5

Conread position: 14-218
Cow position: chr1:12978708-12978506 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 63

Conread position: 14-230
Cow position: chr1:5597184-5597383 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 14-233
Cow position: chr1:55135857-55135648 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 59

Conread position: 14-234
Cow position: chr1:68996208-68995985 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 52

Conread position: 14-241
Cow position: chr1:51445914-51445686 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 154

Conread position: 14-242
Cow position: chr1:93528725-93528496 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 51

Conread position: 14-258
Cow position: chr1:91039144-91039387 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 18

Conread position: 15-241
Cow position: chr1:61564822-61564599 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 7, 20

Conread position: 17-241
Cow position: chr1:33720137-33719920 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 7

Conread position: 18-217
Cow position: chr1:37321977-37322176 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 156

Conread position: 18-232
Cow position: chr1:88652652-88652446 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 7, 43

Conread position: 18-234
Cow position: chr1:64678716-64678511 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 41

Conread position: 18-234
Cow position: chr1:93044042-93043839 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 7, 47

Conread position: 18-237
Cow position: chr1:41697079-41696865 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 36

Conread position: 18-241
Cow position: chr1:22729077-22728854 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 63

Conread position: 18-241
Cow position: chr1:29671500-29671717 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 65

Conread position: 18-241
Cow position: chr1:69678306-69678519 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 6, 43

Conread position: 18-241
Cow position: chr1:71818441-71818655 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 42

Conread position: 18-241
Cow position: chr1:102784979-102784767 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 58

Conread position: 18-242
Cow position: chr1:98360375-98360603 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 18-254
Cow position: chr1:6788262-6788497 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 158

Conread position: 19-234
Cow position: chr1:72463165-72462952 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 14

Conread position: 19-241
Cow position: chr1:44506993-44506774 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 156

Conread position: 19-241
Cow position: chr1:54199359-54199577 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 139

Conread position: 19-241
Cow position: chr1:64804082-64804301 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 58

Conread position: 19-241
Cow position: chr1:95654693-95654909 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 14

Conread position: 19-241
Cow position: chr1:97820707-97820492 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 41

Conread position: 19-266
Cow position: chr1:28563546-28563788 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 83

Conread position: 20-241
Cow position: chr1:1991400-1991618 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 42, 103

Conread position: 20-241
Cow position: chr1:99609391-99609172 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 44

Conread position: 22-233
Cow position: chr1:24413467-24413254 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 158

Conread position: 22-234
Cow position: chr1:24235503-24235707 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 41

Conread position: 22-234
Cow position: chr1:45555382-45555177 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 151

Conread position: 22-234
Cow position: chr1:61391768-61391979 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 38, 146

Conread position: 22-234
Cow position: chr1:68817781-68817985 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 46

Conread position: 22-234
Cow position: chr1:70028596-70028392 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 36

Conread position: 22-241
Cow position: chr1:1956317-1956521 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 22-241
Cow position: chr1:3167057-3167266 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 22-241
Cow position: chr1:70538627-70538410 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 152

Conread position: 22-241
Cow position: chr1:79663657-79663859 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 22-241
Cow position: chr1:81913135-81913345 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 63

Conread position: 22-242
Cow position: chr1:71946354-71946565 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 135

Conread position: 22-245
Cow position: chr1:12595885-12596099 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 143

Conread position: 22-245
Cow position: chr1:81563761-81563535 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 152

Conread position: 22-260
Cow position: chr1:78838812-78838578 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 26

Conread position: 23-233
Cow position: chr1:20384604-20384806 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 39

Conread position: 23-234
Cow position: chr1:63434791-63434996 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 74, 40

Conread position: 23-234
Cow position: chr1:95176954-95176749 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 149

Conread position: 23-241
Cow position: chr1:31234916-31235125 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 23-241
Cow position: chr1:53671721-53671943 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 36

Conread position: 23-241
Cow position: chr1:57900726-57900934 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 45

Conread position: 23-241
Cow position: chr1:81228319-81228533 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 150

Conread position: 23-241
Cow position: chr1:94404229-94404023 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 45

Conread position: 23-244
Cow position: chr1:82443437-82443653 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 55

Conread position: 24-241
Cow position: chr1:95057068-95056862 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 52

Conread position: 25-242
Cow position: chr1:64251033-64251246 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 135

Conread position: 26-240
Cow position: chr1:42873940-42874139 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 55

Conread position: 26-241
Cow position: chr1:83582921-83583131 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 122

Conread position: 26-245
Cow position: chr1:41056690-41056486 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 28-241
Cow position: chr1:14379522-14379723 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 48

Conread position: 28-241
Cow position: chr1:99614459-99614254 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 96, 40

Conread position: 31-233
Cow position: chr1:84910624-84910816 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 102, 58

Conread position: 31-241
Cow position: chr1:29935377-29935575 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 40

Conread position: 31-241
Cow position: chr1:41004353-41004561 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 74, 137

Conread position: 34-241
Cow position: chr1:6077904-6077701 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 70, 15

Conread position: 37-241
Cow position: chr1:7350549-7350345 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 127

Conread position: 40-232
Cow position: chr1:80870114-80869922 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 13

Conread position: 41-232
Cow position: chr1:68763687-68763866 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 42-240
Cow position: chr1:84283070-84282872 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 22

Conread position: 53-204
Cow position: chr1:80311451-80311310 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 53-209
Cow position: chr1:31960214-31960059 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 123

Conread position: 53-234
Cow position: chr1:100537798-100537624 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 63

Conread position: 58-234
Cow position: chr1:33331104-33331275 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 80

Conread position: 59-241
Cow position: chr1:43340628-43340816 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 59-241
Cow position: chr1:55146784-55146608 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 87

Conread position: 62-241
Cow position: chr1:53397965-53397794 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 50

Conread position: 63-241
Cow position: chr1:95215205-95215379 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 13

Conread position: 65-246
Cow position: chr1:83593825-83594006 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 110

Conread position: 68-234
Cow position: chr1:102113132-102113295 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 107

Conread position: 68-241
Cow position: chr1:62964248-62964086 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 62

Conread position: 75-235
Cow position: chr1:89083076-89082920 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 93

Conread position: 94-251
Cow position: chr1:86578893-86578744 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 152, 76

Conread position: 97-234
Cow position: chr1:30504411-30504284 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 97-241
Cow position: chr1:51654351-51654217 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 97-241
Cow position: chr1:55686277-55686414 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 97-241
Cow position: chr1:99118329-99118192 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 14

Conread position: 101-252
Cow position: chr1:89742060-89742217 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 108-242
Cow position: chr1:40062381-40062254 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 112-241
Cow position: chr1:99792740-99792618 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.