Cow genome map
| Conread name: | Ss1.1-rcbr0_006154.5 |
| Conread position: | 1-169 |
| Cow position: | chr10:39228156-39227983 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-182 |
| Cow position: | chr10:15462500-15462316 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 175 |
| Conread position: | 1-198 |
| Cow position: | chr10:46195794-46195598 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 18 |
| Conread position: | 1-201 |
| Cow position: | chr10:51696752-51696554 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 1-205 |
| Cow position: | chr10:2613377-2613175 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 166 |
| Conread position: | 1-207 |
| Cow position: | chr10:47773739-47773536 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 1-209 |
| Cow position: | chr10:28395293-28395493 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 1-212 |
| Cow position: | chr10:24781197-24780989 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 1-222 |
| Cow position: | chr10:35778892-35779110 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-228 |
| Cow position: | chr10:55580265-55580478 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 1-233 |
| Cow position: | chr10:54731030-54730795 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 1-234 |
| Cow position: | chr10:9675452-9675673 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 1-234 |
| Cow position: | chr10:10148657-10148433 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 1-234 |
| Cow position: | chr10:10963996-10963770 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 1-234 |
| Cow position: | chr10:20372116-20372348 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-234 |
| Cow position: | chr10:22390605-22390372 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 181 |
| Conread position: | 1-234 |
| Cow position: | chr10:24022273-24022500 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-234 |
| Cow position: | chr10:29252176-29251945 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-234 |
| Cow position: | chr10:35731516-35731743 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-234 |
| Cow position: | chr10:35868007-35868218 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 1-234 |
| Cow position: | chr10:37287163-37287394 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-234 |
| Cow position: | chr10:57786347-57786120 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-237 |
| Cow position: | chr10:35245938-35246163 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-239 |
| Cow position: | chr10:33665851-33665618 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 1-241 |
| Cow position: | chr10:805199-804971 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 1-241 |
| Cow position: | chr10:1428046-1427816 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 1-241 |
| Cow position: | chr10:6489880-6489642 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 1-241 |
| Cow position: | chr10:6719903-6719678 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 1-241 |
| Cow position: | chr10:13765156-13765388 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 172 |
| Conread position: | 1-241 |
| Cow position: | chr10:15817782-15818020 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 1-241 |
| Cow position: | chr10:20095769-20095530 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 162 |
| Conread position: | 1-241 |
| Cow position: | chr10:20553192-20552957 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-241 |
| Cow position: | chr10:22520153-22520390 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr10:22527893-22528125 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 1-241 |
| Cow position: | chr10:24744554-24744324 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 163 |
| Conread position: | 1-241 |
| Cow position: | chr10:31027635-31027868 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-241 |
| Cow position: | chr10:31362205-31362434 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr10:37529257-37529493 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 1-241 |
| Cow position: | chr10:37668147-37668385 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 24, 175 |
| Conread position: | 1-241 |
| Cow position: | chr10:40163925-40164153 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 1-241 |
| Cow position: | chr10:41802891-41803120 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-241 |
| Cow position: | chr10:41941567-41941804 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 1-241 |
| Cow position: | chr10:45770056-45769816 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 173 |
| Conread position: | 1-241 |
| Cow position: | chr10:51944372-51944138 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 18 |
| Conread position: | 1-241 |
| Cow position: | chr10:52278732-52278503 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 98, 67 |
| Conread position: | 1-241 |
| Cow position: | chr10:53674834-53674599 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-241 |
| Cow position: | chr10:56828309-56828545 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 1-241 |
| Cow position: | chr10:60237085-60237339 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 1-242 |
| Cow position: | chr10:8093308-8093540 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 1-242 |
| Cow position: | chr10:39875145-39875370 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 1-245 |
| Cow position: | chr10:22341586-22341336 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 156 |
| Conread position: | 3-233 |
| Cow position: | chr10:24132813-24133036 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 3-241 |
| Cow position: | chr10:11966837-11967069 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 3-241 |
| Cow position: | chr10:19895407-19895175 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 3-241 |
| Cow position: | chr10:21657433-21657196 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 3-241 |
| Cow position: | chr10:24732314-24732086 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 4-216 |
| Cow position: | chr10:10120199-10119996 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 4-241 |
| Cow position: | chr10:53973851-53973620 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 5-232 |
| Cow position: | chr10:30352855-30352629 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 22, 158 |
| Conread position: | 5-241 |
| Cow position: | chr10:7366779-7367013 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 5-241 |
| Cow position: | chr10:34607566-34607334 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 5-251 |
| Cow position: | chr10:7817112-7816874 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 6-232 |
| Cow position: | chr10:30224690-30224468 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 7-241 |
| Cow position: | chr10:721304-721075 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 7-241 |
| Cow position: | chr10:6436060-6435835 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 7-241 |
| Cow position: | chr10:47412103-47412332 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 7-241 |
| Cow position: | chr10:52296498-52296273 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 15 |
| Conread position: | 8-241 |
| Cow position: | chr10:23936483-23936259 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 14-227 |
| Cow position: | chr10:39303852-39304062 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 148 |
| Conread position: | 14-234 |
| Cow position: | chr10:50359915-50359697 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 14-234 |
| Cow position: | chr10:56475462-56475252 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 6, 134 |
| Conread position: | 14-241 |
| Cow position: | chr10:18042178-18041961 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 14-241 |
| Cow position: | chr10:20997289-20997501 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 14-241 |
| Cow position: | chr10:22616641-22616867 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 14-241 |
| Cow position: | chr10:42745916-42745689 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 15-245 |
| Cow position: | chr10:58259529-58259742 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 17-234 |
| Cow position: | chr10:40420851-40421062 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 18-234 |
| Cow position: | chr10:37512253-37512465 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 18-234 |
| Cow position: | chr10:39227608-39227393 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 18-234 |
| Cow position: | chr10:59571893-59571681 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 18-240 |
| Cow position: | chr10:13391056-13391276 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 7, 73 |
| Conread position: | 18-241 |
| Cow position: | chr10:6505343-6505137 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 18-241 |
| Cow position: | chr10:9774341-9774123 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 18-241 |
| Cow position: | chr10:24763475-24763255 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 147 |
| Conread position: | 18-241 |
| Cow position: | chr10:37235561-37235777 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 18-241 |
| Cow position: | chr10:37415781-37415561 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 5, 43 |
| Conread position: | 18-241 |
| Cow position: | chr10:37818562-37818784 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 155 |
| Conread position: | 18-241 |
| Cow position: | chr10:60960926-60960716 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 45 |
| Conread position: | 18-242 |
| Cow position: | chr10:55733611-55733824 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 18-243 |
| Cow position: | chr10:57457327-57457106 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 18-246 |
| Cow position: | chr10:35802380-35802597 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 19-232 |
| Cow position: | chr10:45371047-45370840 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 8, 152 |
| Conread position: | 19-234 |
| Cow position: | chr10:29588849-29589057 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 53 |
| Conread position: | 19-234 |
| Cow position: | chr10:33732876-33733086 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 5, 67 |
| Conread position: | 19-241 |
| Cow position: | chr10:6173348-6173136 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 19-241 |
| Cow position: | chr10:8404206-8403985 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 156 |
| Conread position: | 19-241 |
| Cow position: | chr10:34554101-34554312 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 14 |
| Conread position: | 20-241 |
| Cow position: | chr10:34655121-34655335 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 145 |
| Conread position: | 22-169 |
| Cow position: | chr10:52695740-52695891 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 22-225 |
| Cow position: | chr10:31534719-31534533 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 22-234 |
| Cow position: | chr10:6665567-6665763 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 22-234 |
| Cow position: | chr10:8923266-8923057 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 22-234 |
| Cow position: | chr10:19678860-19678651 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 81, 143 |
| Conread position: | 22-234 |
| Cow position: | chr10:28152392-28152600 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 140 |
| Conread position: | 22-234 |
| Cow position: | chr10:62286543-62286334 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 141 |
| Conread position: | 22-237 |
| Cow position: | chr10:33215790-33215576 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 22-239 |
| Cow position: | chr10:53357887-53357676 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 139 |
| Conread position: | 22-241 |
| Cow position: | chr10:10134973-10134754 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 153 |
| Conread position: | 22-241 |
| Cow position: | chr10:10720686-10720900 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 22-241 |
| Cow position: | chr10:11080950-11080734 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 82, 143 |
| Conread position: | 22-241 |
| Cow position: | chr10:23056091-23056306 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 22-241 |
| Cow position: | chr10:24871877-24871661 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 22-241 |
| Cow position: | chr10:38014353-38014149 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 146 |
| Conread position: | 22-241 |
| Cow position: | chr10:48462353-48462562 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 37 |
| Conread position: | 22-241 |
| Cow position: | chr10:50609529-50609314 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 61, 149 |
| Conread position: | 22-241 |
| Cow position: | chr10:54504591-54504378 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 23-230 |
| Cow position: | chr10:24375534-24375336 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 23-233 |
| Cow position: | chr10:24561002-24561204 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 23-234 |
| Cow position: | chr10:35904840-35905045 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 23-234 |
| Cow position: | chr10:46227078-46226870 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 23-236 |
| Cow position: | chr10:46493009-46493222 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 23-241 |
| Cow position: | chr10:11247962-11247749 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 23-241 |
| Cow position: | chr10:16598674-16598465 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 149 |
| Conread position: | 23-241 |
| Cow position: | chr10:35862242-35862454 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 117, 39 |
| Conread position: | 23-241 |
| Cow position: | chr10:56080186-56080398 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 37 |
| Conread position: | 25-241 |
| Cow position: | chr10:10468965-10468754 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 25-241 |
| Cow position: | chr10:14098339-14098545 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 33 |
| Conread position: | 25-241 |
| Cow position: | chr10:22321506-22321295 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 26-221 |
| Cow position: | chr10:35901303-35901126 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 26-233 |
| Cow position: | chr10:28840938-28840737 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 64, 115 |
| Conread position: | 26-237 |
| Cow position: | chr10:3362599-3362399 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 52, 47 |
| Conread position: | 26-241 |
| Cow position: | chr10:57142233-57142435 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 31-241 |
| Cow position: | chr10:11213094-11212888 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 34-241 |
| Cow position: | chr10:20447071-20446876 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 136 |
| Conread position: | 36-231 |
| Cow position: | chr10:37709059-37709251 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 36-233 |
| Cow position: | chr10:34175019-34175212 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 67, 135 |
| Conread position: | 36-234 |
| Cow position: | chr10:23447669-23447860 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 36-240 |
| Cow position: | chr10:31400920-31401121 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 61, 133 |
| Conread position: | 36-241 |
| Cow position: | chr10:30441074-30441269 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 132, 12 |
| Conread position: | 36-241 |
| Cow position: | chr10:35791905-35791709 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 69, 137 |
| Conread position: | 37-241 |
| Cow position: | chr10:6852238-6852048 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 37-247 |
| Cow position: | chr10:66194331-66194534 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 38-232 |
| Cow position: | chr10:29166252-29166063 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 38-241 |
| Cow position: | chr10:38513147-38512950 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 131 |
| Conread position: | 39-241 |
| Cow position: | chr10:38725630-38725436 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 39-263 |
| Cow position: | chr10:20897272-20897056 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 41-241 |
| Cow position: | chr10:10985525-10985719 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 42-241 |
| Cow position: | chr10:35026446-35026256 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 45-241 |
| Cow position: | chr10:16414618-16414810 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 5, 118 |
| Conread position: | 53-241 |
| Cow position: | chr10:34661358-34661541 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 59-243 |
| Cow position: | chr10:32174682-32174502 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 66-241 |
| Cow position: | chr10:32503393-32503226 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 67-237 |
| Cow position: | chr10:33067621-33067789 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 68-240 |
| Cow position: | chr10:77326-77167 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 68-241 |
| Cow position: | chr10:57736219-57736388 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 71-234 |
| Cow position: | chr10:28176452-28176610 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 75-237 |
| Cow position: | chr10:15874501-15874659 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 85 |
| Conread position: | 94-241 |
| Cow position: | chr10:26209345-26209485 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 95-234 |
| Cow position: | chr10:51306244-51306109 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 97-233 |
| Cow position: | chr10:35857145-35857270 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 97-234 |
| Cow position: | chr10:1996752-1996882 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 97-234 |
| Cow position: | chr10:8923848-8923718 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 98-231 |
| Cow position: | chr10:48377732-48377859 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 104, 59 |
| Conread position: | 107-241 |
| Cow position: | chr10:26607985-26608112 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 107-241 |
| Cow position: | chr10:38370559-38370686 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 112-241 |
| Cow position: | chr10:25475477-25475355 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.