Cow genome map

Conread name: Ss1.1-rcbr0_006154.5

Conread position: 1-169
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-177
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 1-203
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 62

Conread position: 1-208
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 14

Conread position: 1-209
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 60

Conread position: 1-209
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 18

Conread position: 1-232
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 58

Conread position: 1-232
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 14

Conread position: 1-232
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 167

Conread position: 1-233
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 13, 18

Conread position: 1-233
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 56

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 59

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 154

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 169

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 14

Conread position: 1-240
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 58

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 153

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 14

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 58

Conread position: 1-241
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 52

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 18, 14

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 15

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 257
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 75

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 60

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 9

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 9

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 188
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 69

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 58

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 75

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 14

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 12

Conread position: 1-241
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 22, 171

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 14

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 39

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 84

Conread position: 1-242
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 22, 153

Conread position: 1-242
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 113

Conread position: 1-245
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 39

Conread position: 1-245
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 14

Conread position: 1-250
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 14

Conread position: 1-252
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 69

Conread position: 1-257
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 14

Conread position: 1-259
Cow position:
Alignm length: 268
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 20

Conread position: 1-263
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 24, 177

Conread position: 2-169
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 13

Conread position: 2-234
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 22, 61

Conread position: 2-241
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 23, 161

Conread position: 2-241
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 13

Conread position: 3-231
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 16

Conread position: 3-234
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 12

Conread position: 3-241
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 75

Conread position: 3-241
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 165

Conread position: 3-267
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 12

Conread position: 4-232
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 171

Conread position: 5-233
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 58

Conread position: 5-237
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 10

Conread position: 5-241
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 73

Conread position: 5-241
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 45

Conread position: 5-241
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 165

Conread position: 5-241
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 14

Conread position: 5-242
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 44

Conread position: 6-233
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 19

Conread position: 8-230
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 50

Conread position: 13-232
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 7

Conread position: 14-169
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 63

Conread position: 14-233
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 11

Conread position: 14-234
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 46

Conread position: 14-241
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 6, 67

Conread position: 15-241
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 44

Conread position: 17-241
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 53

Conread position: 17-241
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 177

Conread position: 17-242
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 128

Conread position: 18-168
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 48

Conread position: 18-229
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 37

Conread position: 18-231
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 57

Conread position: 18-234
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 86

Conread position: 18-234
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 63

Conread position: 18-234
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 79

Conread position: 18-236
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 157

Conread position: 18-236
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 9, 42

Conread position: 18-237
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 154

Conread position: 18-241
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 41

Conread position: 19-234
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 19-240
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 89

Conread position: 19-241
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 139

Conread position: 19-241
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 145

Conread position: 19-245
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 154

Conread position: 21-230
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 154

Conread position: 22-172
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 22-215
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 143

Conread position: 22-234
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 143

Conread position: 22-234
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 83, 40

Conread position: 22-234
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 22-234
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 116

Conread position: 22-234
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 49

Conread position: 22-241
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 26

Conread position: 22-246
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 150

Conread position: 22-254
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 37

Conread position: 23-233
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 39

Conread position: 23-234
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 39

Conread position: 23-234
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 149

Conread position: 23-234
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 53

Conread position: 23-234
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 53

Conread position: 23-234
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 55, 36

Conread position: 23-234
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 127, 49

Conread position: 23-241
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 75, 16

Conread position: 23-241
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 55

Conread position: 23-245
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 46

Conread position: 25-241
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 142

Conread position: 26-234
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 106

Conread position: 26-241
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 42

Conread position: 26-241
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 28-165
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 28-240
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 34

Conread position: 28-241
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 25

Conread position: 31-240
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 135

Conread position: 33-234
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 48

Conread position: 34-223
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 24

Conread position: 34-237
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 36-242
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 26

Conread position: 38-241
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 24

Conread position: 39-234
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 20

Conread position: 40-241
Cow position:
Alignm length: 207
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 50

Conread position: 42-241
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 127

Conread position: 44-241
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 32

Conread position: 46-242
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 14

Conread position: 47-233
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 123

Conread position: 52-242
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 12

Conread position: 53-237
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 82

Conread position: 53-240
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 53-241
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 13, 122

Conread position: 63-234
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 93

Conread position: 65-241
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 10

Conread position: 94-241
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 64

Conread position: 97-241
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 97-242
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 67

Conread position: 101-233
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 72

Conread position: 103-242
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 118-233
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.