Cow genome map
| Conread name: | Ss1.1-rcbr0_006154.5 |
| Conread position: | 1-169 |
| Cow position: | chr11:30830599-30830772 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-177 |
| Cow position: | chr11:55494694-55494515 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-203 |
| Cow position: | chr11:30955015-30954815 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 1-208 |
| Cow position: | chr11:13061221-13061418 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-209 |
| Cow position: | chr11:2917571-2917775 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 1-209 |
| Cow position: | chr11:34646604-34646402 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 18 |
| Conread position: | 1-232 |
| Cow position: | chr11:2907508-2907731 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-232 |
| Cow position: | chr11:34121213-34120988 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-232 |
| Cow position: | chr11:44636739-44636969 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 167 |
| Conread position: | 1-233 |
| Cow position: | chr11:42792958-42793186 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 1-233 |
| Cow position: | chr11:80819988-80820209 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 1-234 |
| Cow position: | chr11:8525098-8525325 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 1-234 |
| Cow position: | chr11:33341130-33341358 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 1-234 |
| Cow position: | chr11:52380857-52381082 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 169 |
| Conread position: | 1-240 |
| Cow position: | chr11:20761862-20761627 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-240 |
| Cow position: | chr11:47899283-47899059 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-241 |
| Cow position: | chr11:1071076-1071310 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 1-241 |
| Cow position: | chr11:1849156-1849384 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:2925281-2925509 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-241 |
| Cow position: | chr11:8428526-8428276 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 1-241 |
| Cow position: | chr11:10213549-10213786 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:10620313-10620544 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 1-241 |
| Cow position: | chr11:16251229-16251467 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:16342214-16342460 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:18591419-18591652 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 1-241 |
| Cow position: | chr11:19247184-19247413 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:24601979-24601752 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:28644102-28643863 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 1-241 |
| Cow position: | chr11:30911987-30912211 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:33293764-33294010 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 1-241 |
| Cow position: | chr11:33349686-33349920 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 1-241 |
| Cow position: | chr11:35580275-35580035 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 1-241 |
| Cow position: | chr11:35684486-35684716 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 1-241 |
| Cow position: | chr11:36182705-36182470 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 1-241 |
| Cow position: | chr11:43898153-43897919 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:44036737-44036497 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 1-241 |
| Cow position: | chr11:45646578-45646812 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:50152799-50153037 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 22, 171 |
| Conread position: | 1-241 |
| Cow position: | chr11:53778631-53778394 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:56728964-56728728 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-241 |
| Cow position: | chr11:68206830-68207056 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 1-242 |
| Cow position: | chr11:11232438-11232672 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 1-242 |
| Cow position: | chr11:24937680-24937442 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 153 |
| Conread position: | 1-242 |
| Cow position: | chr11:27405055-27405288 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 14, 113 |
| Conread position: | 1-245 |
| Cow position: | chr11:52297206-52297447 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 1-245 |
| Cow position: | chr11:73924548-73924782 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 1-250 |
| Cow position: | chr11:23586653-23586407 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-252 |
| Cow position: | chr11:2811715-2811954 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 1-257 |
| Cow position: | chr11:2092349-2092105 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 1-259 |
| Cow position: | chr11:48672727-48672464 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 1-263 |
| Cow position: | chr11:47545149-47544886 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 24, 177 |
| Conread position: | 2-169 |
| Cow position: | chr11:39499370-39499202 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 2-234 |
| Cow position: | chr11:50197419-50197656 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 2-241 |
| Cow position: | chr11:20238690-20238455 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 23, 161 |
| Conread position: | 2-241 |
| Cow position: | chr11:69119307-69119081 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 3-231 |
| Cow position: | chr11:67747297-67747073 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 3-234 |
| Cow position: | chr11:59872943-59872714 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 3-241 |
| Cow position: | chr11:6400056-6400291 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 3-241 |
| Cow position: | chr11:48272214-48271976 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 17, 165 |
| Conread position: | 3-267 |
| Cow position: | chr11:21844120-21844382 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 4-232 |
| Cow position: | chr11:61958731-61958959 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 171 |
| Conread position: | 5-233 |
| Cow position: | chr11:23128529-23128750 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 5-237 |
| Cow position: | chr11:27248504-27248277 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 5-241 |
| Cow position: | chr11:15285604-15285836 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 5-241 |
| Cow position: | chr11:21728264-21728486 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 5-241 |
| Cow position: | chr11:59702497-59702266 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 165 |
| Conread position: | 5-241 |
| Cow position: | chr11:80923310-80923553 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 5-242 |
| Cow position: | chr11:4412011-4412237 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 6-233 |
| Cow position: | chr11:17831212-17831438 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 8-230 |
| Cow position: | chr11:71492851-71493068 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 13-232 |
| Cow position: | chr11:71455794-71455578 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 14-169 |
| Cow position: | chr11:48296036-48295876 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 63 |
| Conread position: | 14-233 |
| Cow position: | chr11:71846347-71846559 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 14-234 |
| Cow position: | chr11:17553344-17553558 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 14-241 |
| Cow position: | chr11:55333912-55333690 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 15-241 |
| Cow position: | chr11:63065656-63065435 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 17-241 |
| Cow position: | chr11:25320054-25319832 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 17-241 |
| Cow position: | chr11:43360778-43361015 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 177 |
| Conread position: | 17-242 |
| Cow position: | chr11:62490435-62490214 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 128 |
| Conread position: | 18-168 |
| Cow position: | chr11:70740979-70741131 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 48 |
| Conread position: | 18-229 |
| Cow position: | chr11:259174-259387 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 18-231 |
| Cow position: | chr11:63469873-63469674 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 18-234 |
| Cow position: | chr11:41175-40969 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 18-234 |
| Cow position: | chr11:6154407-6154200 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 18-234 |
| Cow position: | chr11:48544431-48544231 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 18-236 |
| Cow position: | chr11:40818637-40818852 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 5, 157 |
| Conread position: | 18-236 |
| Cow position: | chr11:44575747-44575950 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 9, 42 |
| Conread position: | 18-237 |
| Cow position: | chr11:11558169-11557954 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 5, 154 |
| Conread position: | 18-241 |
| Cow position: | chr11:64090099-64090305 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 19-234 |
| Cow position: | chr11:62979487-62979266 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 19-240 |
| Cow position: | chr11:69810899-69810686 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 19-241 |
| Cow position: | chr11:377645-377867 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 139 |
| Conread position: | 19-241 |
| Cow position: | chr11:39115492-39115275 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 5, 145 |
| Conread position: | 19-245 |
| Cow position: | chr11:83196494-83196275 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 21-230 |
| Cow position: | chr11:25387060-25386858 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 154 |
| Conread position: | 22-172 |
| Cow position: | chr11:48496604-48496746 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 22-215 |
| Cow position: | chr11:955360-955170 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 143 |
| Conread position: | 22-234 |
| Cow position: | chr11:3393216-3393422 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 143 |
| Conread position: | 22-234 |
| Cow position: | chr11:7590185-7589979 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 22-234 |
| Cow position: | chr11:17968589-17968787 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 22-234 |
| Cow position: | chr11:44234348-44234143 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 116 |
| Conread position: | 22-234 |
| Cow position: | chr11:45898061-45898267 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 22-241 |
| Cow position: | chr11:17661083-17660876 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 22-246 |
| Cow position: | chr11:15632561-15632784 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 81, 150 |
| Conread position: | 22-254 |
| Cow position: | chr11:36238773-36238548 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 23-233 |
| Cow position: | chr11:84385645-84385857 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 23-234 |
| Cow position: | chr11:7924597-7924801 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 23-234 |
| Cow position: | chr11:44031997-44031788 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 149 |
| Conread position: | 23-234 |
| Cow position: | chr11:58588338-58588133 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 23-234 |
| Cow position: | chr11:63516819-63516612 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 53 |
| Conread position: | 23-234 |
| Cow position: | chr11:65607700-65607905 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 23-234 |
| Cow position: | chr11:81174878-81174678 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 23-241 |
| Cow position: | chr11:62239736-62239531 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 23-241 |
| Cow position: | chr11:83066489-83066277 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 23-245 |
| Cow position: | chr11:42044000-42044212 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 25-241 |
| Cow position: | chr11:38194147-38193933 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 26-234 |
| Cow position: | chr11:81162444-81162643 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 78, 106 |
| Conread position: | 26-241 |
| Cow position: | chr11:27746912-27746702 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 26-241 |
| Cow position: | chr11:64334840-64334639 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 28-165 |
| Cow position: | chr11:69075898-69075756 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 28-240 |
| Cow position: | chr11:35153837-35154045 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 28-241 |
| Cow position: | chr11:952256-952050 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 31-240 |
| Cow position: | chr11:65762613-65762814 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 135 |
| Conread position: | 33-234 |
| Cow position: | chr11:41239287-41239486 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 34-223 |
| Cow position: | chr11:47851007-47850826 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 34-237 |
| Cow position: | chr11:62749775-62749965 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 36-242 |
| Cow position: | chr11:5526592-5526794 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 38-241 |
| Cow position: | chr11:79728693-79728892 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 39-234 |
| Cow position: | chr11:30192151-30191958 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 40-241 |
| Cow position: | chr11:65431036-65430843 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 42-241 |
| Cow position: | chr11:31352593-31352791 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 127 |
| Conread position: | 44-241 |
| Cow position: | chr11:63520745-63520554 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 46-242 |
| Cow position: | chr11:45872345-45872538 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 47-233 |
| Cow position: | chr11:1362504-1362691 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 52-242 |
| Cow position: | chr11:25165407-25165224 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 53-237 |
| Cow position: | chr11:67951000-67951177 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 53-240 |
| Cow position: | chr11:1599344-1599169 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 53-241 |
| Cow position: | chr11:50778338-50778152 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 63-234 |
| Cow position: | chr11:64044195-64044027 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 65-241 |
| Cow position: | chr11:19508246-19508079 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 94-241 |
| Cow position: | chr11:62808730-62808867 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 97-241 |
| Cow position: | chr11:61454611-61454753 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 97-242 |
| Cow position: | chr11:35363414-35363275 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 101-233 |
| Cow position: | chr11:37118401-37118274 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 103-242 |
| Cow position: | chr11:36647273-36647141 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 118-233 |
| Cow position: | chr11:83033803-83033911 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.